RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 KRT12Q99456 494 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 TRIM51Q9BSJ1 452 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 MCRIP2Q9BUT9 160 aaKnown RBP2.93□□□□□ -1.94
VRK1-202ENST00000553683 WNT5BQ9H1J7 359 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 CPVLQ9H3G5 476 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 DPAGT1Q9H3H5 408 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 SDR39U1Q9NRG7 319 aaPredicted RBP2.93□□□□□ -1.94
VRK1-202ENST00000553683 FGF21Q9NSA1 209 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 TMEM181Q9P2C4 612 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 RASAL2Q9UJF2 1139 aa2.93□□□□□ -1.94
VRK1-202ENST00000553683 HYKKA2RU49 373 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 GLOD5A6NK44 160 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 ADAMDEC1O15204 470 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 XRCC3O43542 346 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 DANCRP0C864 163 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 GCH1P30793 250 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 MAZP56270 477 aaKnown RBP2.92□□□□□ -1.94
VRK1-202ENST00000553683 PRKG2Q13237 762 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 C20orf194Q5TEA3 1177 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 ZNF497Q6ZNH5 498 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 AACSQ86V21 672 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 PIGZQ86VD9 579 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 ZNF614Q8N883 585 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 TSPAN14Q8NG11 270 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 OR2AJ1Q8NGZ0 328 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 FGFBP3Q8TAT2 258 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 PHLDA1Q8WV24 401 aaPredicted RBP2.92□□□□□ -1.94
VRK1-202ENST00000553683 IRGQQ8WZA9 623 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 SUSD6Q92537 303 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 JAKMIP2Q96AA8 810 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 ZNF653Q96CK0 615 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 ARSGQ96EG1 525 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 MOCOSQ96EN8 888 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 CALML4Q96GE6 196 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 SDF4Q9BRK5 362 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 POLR3GLQ9BT43 218 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 INTS9Q9NV88 658 aaKnown RBP2.92□□□□□ -1.94
VRK1-202ENST00000553683 GDE1Q9NZC3 331 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 GPR34Q9UPC5 381 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 EXOGQ9Y2C4 368 aaKnown RBP2.92□□□□□ -1.94
VRK1-202ENST00000553683 PYGO1Q9Y3Y4 419 aa2.92□□□□□ -1.94
VRK1-202ENST00000553683 ANTXRLA6NF34 631 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 TMEM221A6NGB7 291 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 MSGN1A6NI15 193 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 CYSRT1A8MQ03 144 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 IPO8O15397 1037 aaKnown RBP2.91□□□□□ -1.94
VRK1-202ENST00000553683 ZNF821O75541 412 aaPredicted RBP2.91□□□□□ -1.94
VRK1-202ENST00000553683 TRMUO75648 421 aaKnown RBP2.91□□□□□ -1.94
VRK1-202ENST00000553683 NGFP01138 241 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 IGHV4-31P0DP07 118 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 PORP16435 677 aaPredicted RBP2.91□□□□□ -1.94
VRK1-202ENST00000553683 ALDH3A2P51648 485 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 STK4Q13043 487 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 TMEM187Q14656 261 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 CBWD6Q4V339 395 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 CBWD3Q5JTY5 395 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 ARHGEF16Q5VV41 709 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 ZNF772Q68DY9 489 aaPredicted RBP2.91□□□□□ -1.94
VRK1-202ENST00000553683 ZNF613Q6PF04 617 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 FAM198BQ6UWH4 519 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 CEP57L1Q8IYX8 460 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 C17orf53Q8N3J3 647 aaPredicted RBP2.91□□□□□ -1.94
VRK1-202ENST00000553683 DNAJC22Q8N4W6 341 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 NIPA2Q8N8Q9 360 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 SYT2Q8N9I0 419 aaPredicted RBP2.91□□□□□ -1.94
VRK1-202ENST00000553683 OR5AP2Q8NGF4 316 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 OR13J1Q8NGT2 312 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 LPGAT1Q92604 370 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 SLAMF9Q96A28 289 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 SLC22A18Q96BI1 424 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 SPACA9Q96E40 222 aaPredicted RBP2.91□□□□□ -1.94
VRK1-202ENST00000553683 CDRT15Q96T59 188 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 PAFAH2Q99487 392 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 RBM4BQ9BQ04 359 aaKnown RBP2.91□□□□□ -1.94
VRK1-202ENST00000553683 MTMR12Q9C0I1 747 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 MIS12Q9H081 205 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 P2RY12Q9H244 342 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.91□□□□□ -1.94
VRK1-202ENST00000553683 SERINC1Q9NRX5 453 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 RNF186Q9NXI6 227 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 KLHL8Q9P2G9 620 aaPredicted RBP2.91□□□□□ -1.94
VRK1-202ENST00000553683 CACNG5Q9UF02 275 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 LRWD1Q9UFC0 647 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 TBC1D29Q9UFV1 150 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 MTUS1Q9ULD2 1270 aa2.91□□□□□ -1.94
VRK1-202ENST00000553683 MRPS28Q9Y2Q9 187 aaKnown RBP2.91□□□□□ -1.94
VRK1-202ENST00000553683 hCG_1807616A0A1W2PRN6 198 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 O00370 1275 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 ENTPD3O75355 529 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 VTNP04004 478 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 DPEP1P16444 411 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 CLK1P49759 484 aaKnown RBP2.9□□□□□ -1.95
VRK1-202ENST00000553683 GSDMDP57764 484 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 SNRPD1P62314 119 aaKnown RBP2.9□□□□□ -1.95
VRK1-202ENST00000553683 CYP4A22Q5TCH4 519 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 STXBP4Q6ZWJ1 553 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 TMPRSS11FQ6ZWK6 438 aa2.9□□□□□ -1.95
VRK1-202ENST00000553683 TMEM173Q86WV6 379 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms