RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 DPH2Q9BQC3 489 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-208ENST00000553370 ILKAPQ9H0C8 392 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-208ENST00000553370 GOLPH3Q9H4A6 298 aa9.62□□□□□ -0.87
ACTN1-208ENST00000553370 AKIRIN1Q9H9L7 192 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-208ENST00000553370 TXLNGQ9NUQ3 528 aa9.62□□□□□ -0.87
ACTN1-208ENST00000553370 ALG6Q9Y672 507 aa9.62□□□□□ -0.87
ACTN1-208ENST00000553370 MYO7BQ6PIF6 2116 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 HEATR5BQ9P2D3 2071 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 NBPF19A0A087WUL8 3843 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 CLEC18AA5D8T8 446 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 BTN3A1O00481 513 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 GAPDHSO14556 408 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-208ENST00000553370 LDB2O43679 373 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 KLHL41O60662 606 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 LILRA1O75019 489 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 ZNF189O75820 626 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-208ENST00000553370 OR2B3O76000 313 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 PVRP15151 417 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 ST6GAL1P15907 406 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 MC4RP32245 332 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 MARCKSL1P49006 195 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 EIF3EP60228 445 aaKnown RBP9.61□□□□□ -0.87
ACTN1-208ENST00000553370 PRKG2Q13237 762 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 INPP5JQ15735 1006 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-208ENST00000553370 CYP2A13Q16696 494 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 PRR30Q53SZ7 412 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-208ENST00000553370 PLEKHS1Q5SXH7 462 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 PRAMEF17Q5VTA0 474 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 C1orf189Q5VU69 101 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 FAM69BQ5VUD6 431 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 IRAK1BP1Q5VVH5 260 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 MLIPQ5VWP3 458 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 C11orf63Q6NUN7 778 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 JMJD6Q6NYC1 403 aaPredicted RBP9.61□□□□□ -0.87
ACTN1-208ENST00000553370 CLEC18BQ6UXF7 455 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 ARHGEF18Q6ZSZ5 1173 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 BBS12Q6ZW61 710 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 AMIGO1Q86WK6 493 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 IQCKQ8N0W5 287 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 CLEC18CQ8NCF0 446 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 FDCSPQ8NFU4 85 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 OR52E1Q8NGJ3 308 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 OR13C4Q8NGS5 318 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 TM9SF4Q92544 642 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.61□□□□□ -0.87
ACTN1-208ENST00000553370 PNPLA2Q96AD5 504 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 PSMG3-AS1Q96PY0 264 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 CITED4Q96RK1 184 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 TSPY26PQ9H489 355 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 XKR8Q9H6D3 395 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 MVB12BQ9H7P6 319 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 C10orf88Q9H8K7 445 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 COG4Q9H9E3 785 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 PGPEP1Q9NXJ5 209 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 TDRKHQ9Y2W6 561 aaKnown RBP9.61□□□□□ -0.87
ACTN1-208ENST00000553370 CELSR2Q9HCU4 2923 aa9.61□□□□□ -0.87
ACTN1-208ENST00000553370 CCDC78A2IDD5 438 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 GOLGA6L9A6NEM1 432 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 CCL22O00626 93 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 ZNF749O43361 778 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 GAS8O95995 478 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 IGHEP01854 428 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 RBP3P10745 1247 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 PRDX3P30048 256 aaKnown RBP9.6□□□□□ -0.87
ACTN1-208ENST00000553370 SHMT2P34897 504 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 CA5AP35218 305 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 CYLC1P35663 651 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-208ENST00000553370 PSMA6P60900 246 aaKnown RBP9.6□□□□□ -0.87
ACTN1-208ENST00000553370 OTUD4Q01804 1114 aaKnown RBP9.6□□□□□ -0.87
ACTN1-208ENST00000553370 OLIG2Q13516 323 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 BOP1Q14137 746 aaKnown RBP9.6□□□□□ -0.87
ACTN1-208ENST00000553370 SLC9A5Q14940 896 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 BRD3Q15059 726 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 TAZQ16635 292 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 DEFB110Q30KQ9 67 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 GPR33Q49SQ1 333 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 ANKRD20A2Q5SQ80 823 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 VWA5B1Q5TIE3 1220 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 ANKRD20A1Q5TYW2 823 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 ANKRD20A3Q5VUR7 823 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 SLC6A19Q695T7 634 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 HIST2H2BCQ6DN03 193 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 SPESP1Q6UW49 350 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 FAM198BQ6UWH4 519 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 MRGPREQ86SM8 312 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 TRIM73Q86UV7 250 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 LILRA3Q8N6C8 439 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-208ENST00000553370 C19orf47Q8N9M1 422 aaKnown RBP9.6□□□□□ -0.87
ACTN1-208ENST00000553370 SLC38A9Q8NBW4 561 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 RNF214Q8ND24 703 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 PHC3Q8NDX5 983 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 CCDC110Q8TBZ0 833 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 ACTL9Q8TC94 416 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 ELMO1Q92556 727 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 LINC00615Q96LM1 132 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-208ENST00000553370 FER1L6-AS2Q96M78 137 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 IP6K3Q96PC2 410 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 FAM118BQ9BPY3 351 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 DHRS4Q9BTZ2 278 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 RAB6BQ9NRW1 208 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms