RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 INAFM1C9JVW0 142 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 I6L893 689 aaPredicted RBP4.99□□□□□ -1.61
CKAP4-203ENST00000553039 TRAFD1O14545 582 aaPredicted RBP4.99□□□□□ -1.61
CKAP4-203ENST00000553039 KMOO15229 486 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 P4HA2O15460 535 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 ZNF749O43361 778 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 NRDCO43847 1150 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 WFS1O76024 890 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 MTA2O94776 668 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 USP1O94782 785 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 KLHL18O94889 574 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 SLCO2B1O94956 709 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 ZNF202O95125 648 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 KCNH1O95259 989 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 HSP90AA1P07900 732 aaKnown RBP4.99□□□□□ -1.61
CKAP4-203ENST00000553039 UQCRHP07919 91 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 MSL3P1P0C860 447 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 PF4V1P10720 104 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 FDXRP22570 491 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 CASP1P29466 404 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 CDC25BP30305 580 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 CHRNB4P30926 498 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 KRT9P35527 623 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 MECP2P51608 486 aaKnown RBP4.99□□□□□ -1.61
CKAP4-203ENST00000553039 SESN3P58005 492 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 AP2B1P63010 937 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 PRKAA1Q13131 559 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 GPR18Q14330 331 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 SYCP1Q15431 976 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 PLA2G4EQ3MJ16 856 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 CBWD6Q4V339 395 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 ATP13A4Q4VNC1 1196 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 CBWD3Q5JTY5 395 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 CBWD5Q5RIA9 395 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 CATSPEREQ5SY80 951 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 PRAMEF17Q5VTA0 474 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 AGAP9Q5VTM2 703 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 OLFML1Q6UWY5 402 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 FAM183BPQ6ZVS7 135 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 USP45Q70EL2 814 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 PPP1R32Q7Z5V6 425 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 FAM131BQ86XD5 332 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 DOLPP1Q86YN1 238 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 P3H2Q8IVL5 708 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 UMODL1-AS1Q8N2C9 162 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 WDTC1Q8N5D0 677 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 C1orf162Q8NEQ5 155 aaPredicted RBP4.99□□□□□ -1.61
CKAP4-203ENST00000553039 PROKR1Q8TCW9 393 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 AGAP11Q8TF27 550 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 RND1Q92730 232 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 C18orf8Q96DM3 657 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 FANCD2OSQ96PS1 177 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 CPXM1Q96SM3 734 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 TBCBQ99426 244 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 ELAC2Q9BQ52 826 aaKnown RBP4.99□□□□□ -1.61
CKAP4-203ENST00000553039 CINPQ9BW66 212 aaPredicted RBP4.99□□□□□ -1.61
CKAP4-203ENST00000553039 LIME1Q9H400 295 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 MRM3Q9HC36 420 aaKnown RBP4.99□□□□□ -1.61
CKAP4-203ENST00000553039 RASSF1Q9NS23 344 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 BEX4Q9NWD9 120 aaPredicted RBP4.99□□□□□ -1.61
CKAP4-203ENST00000553039 ZNF69Q9UC07 566 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 ARMCX3Q9UH62 379 aaPredicted RBP4.99□□□□□ -1.61
CKAP4-203ENST00000553039 CDC23Q9UJX2 597 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 FBXL4Q9UKA2 621 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 ADAM21Q9UKJ8 722 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 DNPEPQ9ULA0 475 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 MKL2Q9ULH7 1088 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 NPFFR2Q9Y5X5 522 aa4.99□□□□□ -1.61
CKAP4-203ENST00000553039 FLNAP21333 2647 aaKnown RBP4.99□□□□□ -1.61
CKAP4-203ENST00000553039 NSD1Q96L73 2696 aaPredicted RBP4.99□□□□□ -1.61
CKAP4-203ENST00000553039 RGSL1A5PLK6 1076 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 OR5K3A6NET4 321 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ARHGAP42A6NI28 874 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 MATN2O00339 956 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 CES2O00748 559 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 TTI1O43156 1089 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ASNA1O43681 348 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 KLRC4O43908 158 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 PRAMEF11O60813 436 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 SOCS5O75159 536 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 LRIG2O94898 1065 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 TOXO94900 526 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 CALCAP01258 141 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ALBP02768 609 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ATP1A1P05023 1023 aaKnown RBP4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ICAM2P13598 275 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ZNF30P17039 623 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ZNF7P17097 686 aaPredicted RBP4.98□□□□□ -1.61
CKAP4-203ENST00000553039 BMP7P18075 431 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 CD53P19397 219 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 CDH3P22223 829 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ALAS2P22557 587 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 CCND1P24385 295 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 EPHB2P29323 1055 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 IL2P60568 153 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 FKBP3Q00688 224 aaKnown RBP4.98□□□□□ -1.61
CKAP4-203ENST00000553039 ALDH6A1Q02252 535 aaKnown RBP4.98□□□□□ -1.61
CKAP4-203ENST00000553039 CACNG1Q06432 222 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 INSCQ1MX18 579 aa4.98□□□□□ -1.61
CKAP4-203ENST00000553039 FOXD4L6Q3SYB3 417 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms