RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 PPP1CAP62136 330 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 SHC2P98077 582 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 ZFP36L1Q07352 338 aaKnown RBP8.87□□□□□ -0.99
CCDC59-207ENST00000552606 FOXC1Q12948 553 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 ZNF460Q14592 562 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 ISXQ2M1V0 245 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 KLHL38Q2WGJ6 581 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 TTLL9Q3SXZ7 439 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 NKAIN2Q5VXU1 208 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 WDR74Q6RFH5 385 aaPredicted RBP8.87□□□□□ -0.99
CCDC59-207ENST00000552606 PAQR3Q6TCH7 311 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 CYHR1Q6ZMK1 362 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 ZNF574Q6ZN55 896 aaPredicted RBP8.87□□□□□ -0.99
CCDC59-207ENST00000552606 RBM44Q6ZP01 1051 aaKnown RBP8.87□□□□□ -0.99
CCDC59-207ENST00000552606 PIWIL4Q7Z3Z4 852 aaKnown RBP8.87□□□□□ -0.99
CCDC59-207ENST00000552606 TMPRSS12Q86WS5 348 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 DCUN1D3Q8IWE4 304 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 CTAGE3PQ8IX95 158 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 PHC3Q8NDX5 983 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 OR10G6Q8NH81 332 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 HNRNPLLQ8WVV9 542 aaKnown RBP8.87□□□□□ -0.99
CCDC59-207ENST00000552606 SLC44A1Q8WWI5 657 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 INPP5DQ92835 1189 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 ELMO2Q96JJ3 720 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 CYTH2Q99418 400 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 PAFAH2Q99487 392 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 RAB33BQ9H082 229 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 TRIT1Q9H3H1 467 aaKnown RBP8.87□□□□□ -0.99
CCDC59-207ENST00000552606 TFB2MQ9H5Q4 396 aaKnown RBP8.87□□□□□ -0.99
CCDC59-207ENST00000552606 RDH14Q9HBH5 336 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 POPDC3Q9HBV1 291 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 ARGLU1Q9NWB6 273 aaPredicted RBP8.87□□□□□ -0.99
CCDC59-207ENST00000552606 PDP2Q9P2J9 529 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 TSR3Q9UJK0 312 aaKnown RBP8.87□□□□□ -0.99
CCDC59-207ENST00000552606 KLK13Q9UKR3 277 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 IKZF3Q9UKT9 509 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 CLCA2Q9UQC9 943 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 VWA7Q9Y334 891 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 ENTPD2Q9Y5L3 495 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 COLEC10Q9Y6Z7 277 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 SDK2Q58EX2 2172 aa8.87□□□□□ -0.99
CCDC59-207ENST00000552606 A0A087WUV0 522 aaPredicted RBP8.86□□□□□ -0.99
CCDC59-207ENST00000552606 A0A1W2PNU3 283 aaPredicted RBP8.86□□□□□ -0.99
CCDC59-207ENST00000552606 FAM149AA5PLN7 773 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 OR5K3A6NET4 321 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 GFYI3L273 518 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 MYO1CO00159 1063 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 BTN3A1O00481 513 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 CSO75390 466 aaKnown RBP8.86□□□□□ -0.99
CCDC59-207ENST00000552606 PROS1P07225 676 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 PEBP1P30086 187 aaKnown RBP8.86□□□□□ -0.99
CCDC59-207ENST00000552606 SPRP35270 261 aaPredicted RBP8.86□□□□□ -0.99
CCDC59-207ENST00000552606 SKIV2L2P42285 1042 aaKnown RBP8.86□□□□□ -0.99
CCDC59-207ENST00000552606 MAGEA12P43365 314 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 POU4F1Q01851 419 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 ABRQ12979 859 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 SP140Q13342 867 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 BIRC2Q13490 618 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 CAMK2BQ13554 666 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 NAA30Q147X3 362 aaPredicted RBP8.86□□□□□ -0.99
CCDC59-207ENST00000552606 PLCL1Q15111 1095 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 AMZ1Q400G9 498 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 CCSMST1Q4G0I0 132 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 GRTP1Q5TC63 336 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 LRRC8EQ6NSJ5 796 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 UGT3A1Q6NUS8 523 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 MARCH9Q86YJ5 346 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 GALNT15Q8N3T1 639 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 FBXO15Q8NCQ5 510 aaPredicted RBP8.86□□□□□ -0.99
CCDC59-207ENST00000552606 OR4D9Q8NGE8 314 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 FLVCR1-AS1Q8TAF5 88 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 UHMK1Q8TAS1 419 aaKnown RBP8.86□□□□□ -0.99
CCDC59-207ENST00000552606 DENND1AQ8TEH3 1009 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 DCAKDQ8WVC6 231 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 EEF1AKMT1Q8WVE0 214 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 ASB11Q8WXH4 323 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 DLG3Q92796 817 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 ISL2Q96A47 359 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 LINGO1Q96FE5 620 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 DEPDC7Q96QD5 511 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 FERD3LQ96RJ6 166 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 SCNM1Q9BWG6 230 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 PARD6BQ9BYG5 372 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 SEMA6CQ9H3T2 930 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 SYNDIG1Q9H7V2 258 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 CAB39LQ9H9S4 337 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.86□□□□□ -0.99
CCDC59-207ENST00000552606 TXNDC16Q9P2K2 825 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 EPHA6Q9UF33 1036 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 POLG2Q9UHN1 485 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 ZNF180Q9UJW8 692 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 NEUROG3Q9Y4Z2 214 aa8.86□□□□□ -0.99
CCDC59-207ENST00000552606 NCOR2Q9Y618 2525 aa8.85□□□□□ -0.99
CCDC59-207ENST00000552606 IGHV5-10-1A0A0J9YXX1 117 aa8.85□□□□□ -0.99
CCDC59-207ENST00000552606 BTN3A3O00478 584 aa8.85□□□□□ -0.99
CCDC59-207ENST00000552606 PHGDHO43175 533 aaKnown RBP8.85□□□□□ -0.99
CCDC59-207ENST00000552606 ZW10O43264 779 aa8.85□□□□□ -0.99
CCDC59-207ENST00000552606 ALDOAP04075 364 aaKnown RBP8.85□□□□□ -0.99
CCDC59-207ENST00000552606 RPN2P04844 631 aa8.85□□□□□ -0.99
CCDC59-207ENST00000552606 NUDT17P0C025 328 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms