RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ICKQ9UPZ9 632 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 AHCTF1Q8WYP5 2266 aa17.94■□□□□ 0.46
PRPF40B-216ENST00000552301 C2orf74A8MZ97 194 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 BTN3A1O00481 513 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 MAP3K7O43318 606 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 CCNFP41002 786 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 MC2RQ01718 297 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 MGAT5Q09328 741 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 FRG1Q14331 258 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 UGT3A1Q6NUS8 523 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 TRMT10BQ6PF06 316 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 CEACAM20Q6UY09 585 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 CAPN12Q6ZSI9 719 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 KMT5CQ86Y97 462 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 CARFQ8N187 725 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 SIDT2Q8NBJ9 832 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 MAGEC3Q8TD91 643 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 AARSD1Q9BTE6 412 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 LRRC1Q9BTT6 524 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 RAB11FIP5Q9BXF6 653 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 SOHLH2Q9NX45 425 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 OR6C2Q9NZP2 312 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 KLHL42Q9P2K6 505 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 TRMT6Q9UJA5 497 aaKnown RBP17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 POMT2Q9UKY4 750 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 SLC39A10Q9ULF5 831 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 PLAGL1Q9UM63 463 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 PCDHGA3Q9Y5H0 932 aa17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 ANKRD11Q6UB99 2663 aaPredicted RBP17.93■□□□□ 0.46
PRPF40B-216ENST00000552301 PIPSLA2A3N6 862 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 C9orf172C9J069 976 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 BTN3A3O00478 584 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 POLR1CO15160 346 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 ZBTB11O95625 1053 aaPredicted RBP17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 NELFEP18615 380 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 ABCG1P45844 678 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 RAB28P51157 221 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 KPNA2P52292 529 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 ACSBG2Q5FVE4 666 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 TEDDM1Q5T9Z0 273 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 BROXQ5VW32 411 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 ANKS6Q68DC2 871 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 ZNF549Q6P9A3 640 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 GALNT7Q86SF2 657 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 MMGT1Q8N4V1 131 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 CEP112Q8N8E3 955 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 BMPERQ8N8U9 685 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 FBXO25Q8TCJ0 367 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 KLHL6Q8WZ60 621 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 INPP5DQ92835 1189 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 RAD51AP1Q96B01 352 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 NDNQ99608 321 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 GPR21Q99679 349 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 CTRCQ99895 268 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 ZPBPQ9BS86 351 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 PHACTR1Q9C0D0 580 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 PLAC1Q9HBJ0 212 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 FBXO8Q9NRD0 319 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 LATS2Q9NRM7 1088 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 NSMCE4AQ9NXX6 385 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 TAS2R13Q9NYV9 303 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 ACTR10Q9NZ32 417 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 FOXJ2Q9P0K8 574 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 RUVBL2Q9Y230 463 aaKnown RBP17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 B3GALT1Q9Y5Z6 326 aa17.92■□□□□ 0.46
PRPF40B-216ENST00000552301 WDFY3Q8IZQ1 3526 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 A0A087WV48 116 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 IGHV5-51A0A0C4DH38 117 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 ESYT3A0FGR9 886 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 KLK10O43240 276 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 CHRM5P08912 532 aaPredicted RBP17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 ENO3P13929 434 aaPredicted RBP17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 PKLRP30613 574 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 BDKRB1P46663 353 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 CLCN7P51798 805 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 HSD11B2P80365 405 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 GUCY2DQ02846 1103 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 CUL1Q13616 776 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 GBX1Q14549 363 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 KLHL38Q2WGJ6 581 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 TMTC4Q5T4D3 741 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 SPACA3Q8IXA5 215 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 ADGRF3Q8IZF5 1079 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 GPATCH11Q8N954 259 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 CDKL2Q92772 493 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 OR6C1Q96RD1 312 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 DPH1Q9BZG8 443 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 C1GALT1Q9NS00 363 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 SIDT1Q9NXL6 827 aaKnown RBP17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 SEMA5BQ9P283 1151 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 SLC17A6Q9P2U8 582 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 GALPQ9UBC7 116 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 ACSL6Q9UKU0 697 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 CORO1CQ9ULV4 474 aaPredicted RBP17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 DHRS7Q9Y394 339 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 NFS1Q9Y697 457 aa17.91■□□□□ 0.46
PRPF40B-216ENST00000552301 STMND1H3BQB6 276 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 CATP04040 527 aaKnown RBP17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 LIPCP11150 499 aa17.9■□□□□ 0.46
PRPF40B-216ENST00000552301 PRDX3P30048 256 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms