RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 MMP20O60882 483 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 RSL1D1O76021 490 aaKnown RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 KAT7O95251 611 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 CLDN9O95484 217 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 HIST1H2AGP0C0S8 130 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 G6PDP11413 515 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 HIST1H2ADP20671 130 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 SLC6A2P23975 617 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 PEX2P28328 305 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 PBLDP30039 288 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 EIF2DP41214 584 aaKnown RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 BDKRB1P46663 353 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 PREPP48147 710 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 HNMTP50135 292 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 POLR2JP52435 117 aaKnown RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 GTF2A1P52655 376 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 RPL38P63173 70 aaKnown RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 YBX1P67809 324 aaKnown RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 TMEM115Q12893 351 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 ADGRE1Q14246 886 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 CAPRIN1Q14444 709 aaKnown RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 KIAA0040Q15053 153 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 SYTL3Q4VX76 610 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 TIGD2Q4W5G0 525 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 RFTN2Q52LD8 501 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 IL23RQ5VWK5 629 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 LPCAT4Q643R3 524 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 ZFP1Q6P2D0 407 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 XKR5Q6UX68 686 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 IZUMO2Q6UXV1 221 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 ERN2Q76MJ5 926 aaKnown RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 TRIM46Q7Z4K8 759 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 TRIM74Q86UV6 250 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 NLRP8Q86W28 1048 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 SLC15A3Q8IY34 581 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 KLHDC8AQ8IYD2 350 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 MCOLN3Q8TDD5 553 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 ASZ1Q8WWH4 475 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 SUSD6Q92537 303 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 FOXJ1Q92949 421 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 VPS33AQ96AX1 596 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 LRRC58Q96CX6 371 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 HIST1H2AHQ96KK5 128 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 HIST1H2AJQ99878 128 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 HOPXQ9BPY8 73 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 ECSITQ9BQ95 431 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 CCM2Q9BSQ5 444 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 H2AFJQ9BTM1 129 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 EPHX3Q9H6B9 360 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 ACTR8Q9H981 624 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 IL1RL2Q9HB29 575 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 DNAJC11Q9NVH1 559 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 GID8Q9NWU2 228 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 ASIC5Q9NY37 505 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 RIMS3Q9UJD0 308 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 ZNF490Q9ULM2 529 aaPredicted RBP11.23□□□□□ -0.61
RAB5C-208ENST00000551338 PCDHA9Q9Y5H5 950 aa11.23□□□□□ -0.61
RAB5C-208ENST00000551338 TBC1D3BA6NDS4 549 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 PABPN1LA6NDY0 278 aaKnown RBP11.22□□□□□ -0.61
RAB5C-208ENST00000551338 GRXCR2A6NFK2 248 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 CCDC154A6NI56 674 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 K7ESM1 405 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 LZTS3O60299 673 aaPredicted RBP11.22□□□□□ -0.61
RAB5C-208ENST00000551338 DNAJA2O60884 412 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 EPHX1P07099 455 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 ATP6V1B2P21281 511 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 JAK1P23458 1154 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 ITPKAP23677 461 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 P2RY2P41231 377 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 GPR1P46091 355 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 PFN3P60673 137 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 HMGCS1Q01581 520 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 DPTQ07507 201 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 CNTN1Q12860 1018 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 ABRQ12979 859 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 NFYCQ13952 458 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 CCSMST1Q4G0I0 132 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 SFT2D3Q587I9 215 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 SGO1Q5FBB7 561 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 PIP5KL1Q5T9C9 394 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 OGFRL1Q5TC84 451 aaPredicted RBP11.22□□□□□ -0.61
RAB5C-208ENST00000551338 RAET1GQ6H3X3 334 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 SPATA24Q86W54 205 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 GALNT13Q8IUC8 556 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 MMAAQ8IVH4 418 aaKnown RBP11.22□□□□□ -0.61
RAB5C-208ENST00000551338 YAF2Q8IY57 180 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 SLC22A15Q8IZD6 547 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 RGL4Q8IZJ4 473 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 L3MBTL4Q8NA19 623 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 PPP2R3CQ969Q6 453 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 TMEM125Q96AQ2 219 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 TMEM159Q96B96 161 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 PYCR2Q96C36 320 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 ERLEC1Q96DZ1 483 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 DUS3LQ96G46 650 aaKnown RBP11.22□□□□□ -0.61
RAB5C-208ENST00000551338 ZNF184Q99676 751 aaPredicted RBP11.22□□□□□ -0.61
RAB5C-208ENST00000551338 ACPTQ9BZG2 426 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 ATG10Q9H0Y0 220 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 LRTM1Q9HBL6 345 aa11.22□□□□□ -0.61
RAB5C-208ENST00000551338 DYRK4Q9NR20 520 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms