RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 FAF2Q96CS3 445 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 RMDN2Q96LZ7 410 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 GBP5Q96PP8 586 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 C17orf62Q9BQA9 187 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 PITPNM3Q9BZ71 974 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 SLC25A51Q9H1U9 297 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 DEF6Q9H4E7 631 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 AIPL1Q9NZN9 384 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 IFT80Q9P2H3 777 aaPredicted RBP10.14□□□□□ -0.79
VPS29-208ENST00000550267 NDOR1Q9UHB4 597 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 ACSL5Q9ULC5 683 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 COLEC10Q9Y6Z7 277 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 AKAP9Q99996 3911 aa10.14□□□□□ -0.79
VPS29-208ENST00000550267 PRRC2CQ9Y520 2896 aaKnown RBP10.13□□□□□ -0.79
VPS29-208ENST00000550267 GLYATL1P3A0A0U1RQE8 302 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 A0A1W2PQJ5 194 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 CCDC78A2IDD5 438 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 CCDC66A2RUB6 948 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 MATN2O00339 956 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 BUD23O43709 281 aaKnown RBP10.13□□□□□ -0.79
VPS29-208ENST00000550267 PMPCBO75439 489 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 POLBP06746 335 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 AKT1P31749 480 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 PTGER4P35408 488 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 HMGCLP35914 325 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 ADH7P40394 386 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 TAS2R40P59535 323 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 DCDP81605 110 aaKnown RBP10.13□□□□□ -0.79
VPS29-208ENST00000550267 AP1B1Q10567 949 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 AIMP2Q13155 320 aaKnown RBP10.13□□□□□ -0.79
VPS29-208ENST00000550267 ZNF169Q14929 603 aaPredicted RBP10.13□□□□□ -0.79
VPS29-208ENST00000550267 PDK2Q15119 407 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 DEFB110Q30KQ9 67 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 CCDC70Q6NSX1 233 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 IGFL2Q6UWQ7 119 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 C8orf86Q6ZUL3 223 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 DAAM2Q86T65 1068 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 GPR135Q8IZ08 494 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 NXPE1Q8N323 547 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 ACVR1CQ8NER5 493 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 OR2L2Q8NH16 312 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 ITLN2Q8WWU7 325 aaPredicted RBP10.13□□□□□ -0.79
VPS29-208ENST00000550267 LCN9Q8WX39 176 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 PTERQ96BW5 349 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 CNDP1Q96KN2 507 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 ZNF830Q96NB3 372 aaPredicted RBP10.13□□□□□ -0.79
VPS29-208ENST00000550267 SRPK1Q96SB4 655 aaKnown RBP10.13□□□□□ -0.79
VPS29-208ENST00000550267 SLX1AQ9BQ83 275 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 SPRTNQ9H040 489 aaPredicted RBP10.13□□□□□ -0.79
VPS29-208ENST00000550267 HSD3B7Q9H2F3 369 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 SRMSQ9H3Y6 488 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 FAM60AQ9NP50 221 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 SLC6A20Q9NP91 592 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 UBP1Q9NZI7 540 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 IL17CQ9P0M4 197 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 DHCR7Q9UBM7 475 aaKnown RBP10.13□□□□□ -0.79
VPS29-208ENST00000550267 HEY1Q9Y5J3 304 aa10.13□□□□□ -0.79
VPS29-208ENST00000550267 KLF2Q9Y5W3 355 aaPredicted RBP10.13□□□□□ -0.79
VPS29-208ENST00000550267 H3BMH7 237 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 AGPSO00116 658 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 MYO1FO00160 1098 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 GAPDHSO14556 408 aaPredicted RBP10.12□□□□□ -0.79
VPS29-208ENST00000550267 HCRTR1O43613 425 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 JRKO75564 520 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 OR2B3O76000 313 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 CTSBP07858 339 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 MSH3P20585 1137 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 KCNK10P57789 538 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 SLC14A2Q15849 920 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 LONRF2Q1L5Z9 754 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 KRTAP21-3Q3LHN1 58 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 B3GNTL1Q67FW5 361 aaPredicted RBP10.12□□□□□ -0.79
VPS29-208ENST00000550267 RHBDD2Q6NTF9 364 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 FAM180AQ6UWF9 173 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 MAP7D3Q8IWC1 876 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 CFAP206Q8IYR0 622 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 DTX3LQ8TDB6 740 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 N4BP2L2Q92802 583 aaPredicted RBP10.12□□□□□ -0.79
VPS29-208ENST00000550267 RELTQ969Z4 430 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 RNF157Q96PX1 679 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 FERD3LQ96RJ6 166 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 ALG2Q9H553 416 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 GLOD4Q9HC38 313 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 ZFP64Q9NPA5 681 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 OLAHQ9NV23 265 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 FBXL4Q9UKA2 621 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 C2CD3Q4AC94 2353 aa10.12□□□□□ -0.79
VPS29-208ENST00000550267 C2orf74A8MZ97 194 aa10.11□□□□□ -0.79
VPS29-208ENST00000550267 SGTAO43765 313 aa10.11□□□□□ -0.79
VPS29-208ENST00000550267 CYP1A2P05177 515 aa10.11□□□□□ -0.79
VPS29-208ENST00000550267 CD63P08962 238 aa10.11□□□□□ -0.79
VPS29-208ENST00000550267 COX6B1P14854 86 aa10.11□□□□□ -0.79
VPS29-208ENST00000550267 HTR1EP28566 365 aa10.11□□□□□ -0.79
VPS29-208ENST00000550267 GABRA4P48169 554 aa10.11□□□□□ -0.79
VPS29-208ENST00000550267 OTUD4Q01804 1114 aaKnown RBP10.11□□□□□ -0.79
VPS29-208ENST00000550267 ITGA9Q13797 1035 aa10.11□□□□□ -0.79
VPS29-208ENST00000550267 PTPRCAPQ14761 206 aa10.11□□□□□ -0.79
VPS29-208ENST00000550267 NKAIN1Q4KMZ8 207 aa10.11□□□□□ -0.79
VPS29-208ENST00000550267 BCL7AQ4VC05 210 aa10.11□□□□□ -0.79
VPS29-208ENST00000550267 SIRPB2Q5JXA9 342 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms