RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 NCF4Q15080 339 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 ZIC1Q15915 447 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 SYTL3Q4VX76 610 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 PAPD7Q5XG87 772 aaKnown RBP16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 AFTPHQ6ULP2 937 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 NAPRTQ6XQN6 538 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 UNC5AQ6ZN44 842 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 TBC1D21Q8IYX1 336 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 OR5K2Q8NHB8 316 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 ALS2CR12Q96Q35 445 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 OR2A14Q96R47 310 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 FAM60AQ9NP50 221 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 SPHK1Q9NYA1 384 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 ANKMY1Q9P2S6 941 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 SLC2A6Q9UGQ3 507 aa16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 RP1L1Q8IWN7 2480 aaPredicted RBP16.82■□□□□ 0.28
CHMP1A-205ENST00000548650 HEATR9A2RTY3 570 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 E7EQ34 232 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 MAP3K7O43318 606 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 ZNF749O43361 778 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 HCRTR1O43613 425 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 OR1I1O60431 355 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 TMEM63AO94886 807 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 GOT2P00505 430 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 CHRM5P08912 532 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 PEBP1P30086 187 aaKnown RBP16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 GRIA1P42261 906 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 DEFB110Q30KQ9 67 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 TSTD2Q5T7W7 516 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 ZNF534Q76KX8 674 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 DNAAF3Q8N9W5 541 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 HDAC10Q969S8 669 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 ZNF778Q96MU6 729 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 RANBP9Q96S59 729 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 DPH2Q9BQC3 489 aaPredicted RBP16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 CHRNA10Q9GZZ6 450 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 ETNK1Q9HBU6 452 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 SERTAD3Q9UJW9 196 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 RIMKLBQ9ULI2 386 aa16.81■□□□□ 0.28
CHMP1A-205ENST00000548650 SPTBN1Q01082 2364 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 IFNB1P01574 187 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 OR56A5P0C7T3 313 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 FDFT1P37268 417 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 CCL11P51671 97 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 SEMA3AQ14563 771 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 NADK2Q4G0N4 442 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 SEL1L2Q5TEA6 688 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 PPP1R21Q6ZMI0 780 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 PRUNE1Q86TP1 453 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 ATCAYQ86WG3 371 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 ZBTB2Q8N680 514 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 LKAAEAR1Q8TD35 194 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 TCTN2Q96GX1 697 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 FRMD8P1Q9BZ68 369 aaPredicted RBP16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 CASS4Q9NQ75 786 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 OR6C2Q9NZP2 312 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 IMPACTQ9P2X3 320 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 POLG2Q9UHN1 485 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 PLAGL1Q9UM63 463 aa16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 TDRKHQ9Y2W6 561 aaKnown RBP16.8■□□□□ 0.28
CHMP1A-205ENST00000548650 A0A0J9YY10 115 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 C9J4A7 227 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 SORBS2O94875 1100 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 CTSBP07858 339 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 HBQ1P09105 142 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 CDC25BP30305 580 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 PKLRP30613 574 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 STIP1P31948 543 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 PLOD1Q02809 727 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 ATP1A4Q13733 1029 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 LYPLAL1Q5VWZ2 237 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 HOOK3Q86VS8 718 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 SLC13A5Q86YT5 568 aaPredicted RBP16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 GPR135Q8IZ08 494 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 SLC22A15Q8IZD6 547 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 RNF10Q8N5U6 811 aaKnown RBP16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 GLIS1Q8NBF1 620 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 C1orf54Q8WWF1 131 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 SLC7A5P2Q9GIP4 190 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 CDYLQ9Y232 598 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 TCAF1Q9Y4C2 921 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 ANKRD12Q6UB98 2062 aa16.79■□□□□ 0.28
CHMP1A-205ENST00000548650 E7EVH7 732 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 KLF7O75840 302 aaPredicted RBP16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 OR2B3O76000 313 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 GAS8O95995 478 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 CBSLP0DN79 551 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 ETS1P14921 441 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 ADRA1DP25100 572 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 CCR7P32248 378 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 CBSP35520 551 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 UQCRFS1P47985 274 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 SLC5A12Q1EHB4 618 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 RHBDD2Q6NTF9 364 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 MRGPREQ86SM8 312 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 VRK3Q8IV63 474 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 FAM26EQ8N5C1 309 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 SPC24Q8NBT2 197 aa16.78■□□□□ 0.28
CHMP1A-205ENST00000548650 FDCSPQ8NFU4 85 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms