RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 ZNF583Q96ND8 569 aa18.11■□□□□ 0.49
PRPF40B-208ENST00000548436 ZBTB18Q99592 522 aa18.11■□□□□ 0.49
PRPF40B-208ENST00000548436 SLC29A3Q9BZD2 475 aa18.11■□□□□ 0.49
PRPF40B-208ENST00000548436 ACPTQ9BZG2 426 aa18.11■□□□□ 0.49
PRPF40B-208ENST00000548436 ACTR8Q9H981 624 aa18.11■□□□□ 0.49
PRPF40B-208ENST00000548436 PARVBQ9HBI1 364 aa18.11■□□□□ 0.49
PRPF40B-208ENST00000548436 PNPLA3Q9NST1 481 aa18.11■□□□□ 0.49
PRPF40B-208ENST00000548436 MYO7AQ13402 2215 aa18.11■□□□□ 0.49
PRPF40B-208ENST00000548436 EIF3FO00303 357 aaPredicted RBP18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 NUAK1O60285 661 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 RASAL1O95294 804 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 PDYNP01213 254 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 ROR2Q01974 943 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 BOP1Q14137 746 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 USP39Q53GS9 565 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 TMTC4Q5T4D3 741 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 CACHD1Q5VU97 1274 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 FAM47BQ8NA70 645 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 TSPAN14Q8NG11 270 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 OR8J3Q8NGG0 315 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 CLHC1Q8NHS4 586 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 SCAMP4Q969E2 229 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 NSMCE2Q96MF7 247 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 EMILIN2Q9BXX0 1053 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 RBM38Q9H0Z9 239 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 CLMPQ9H6B4 373 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 CAAP1Q9H8G2 361 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 SPHK2Q9NRA0 654 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 TDP1Q9NUW8 608 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 C1orf109Q9NX04 203 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 ASIC5Q9NY37 505 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 MAGEL2Q9UJ55 1249 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 ZBBXA8MT70 800 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 WASH3PC4AMC7 463 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 AKT1P31749 480 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 EPHA5P54756 1037 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 HTRA4P83105 476 aaPredicted RBP18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 LY6G5CQ5SRR4 150 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 PLPP4Q5VZY2 271 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 CWF19L1Q69YN2 538 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 HSD11B1LQ7Z5J1 315 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 RIMKLAQ8IXN7 391 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 SORCS1Q8WY21 1168 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 CLP1Q92989 425 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 PYCR2Q96C36 320 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 NMD3Q96D46 503 aaKnown RBP18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 RNF145Q96MT1 663 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 ADI1Q9BV57 179 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 CHID1Q9BWS9 393 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 IKZF5Q9H5V7 419 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 PKD2L2Q9NZM6 624 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 MYRFQ9Y2G1 1151 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 HCFC2Q9Y5Z7 792 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 COMMD3-BMI1R4GMX3 469 aa18.1■□□□□ 0.49
PRPF40B-208ENST00000548436 EI24O14681 340 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 AREL1O15033 823 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 PGRP06401 933 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 C8GP07360 202 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 BCKDHAP12694 445 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 GGT1P19440 569 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 NR1H2P55055 460 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 POLR2LP62875 67 aaKnown RBP18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 MERTKQ12866 999 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 MAPKAPK3Q16644 382 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 NEK5Q6P3R8 708 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 MSRB3Q8IXL7 192 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 NAT16Q8N8M0 369 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 GLB1L3Q8NCI6 653 aaPredicted RBP18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 ZFP28Q8NHY6 868 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 BPIFB1Q8TDL5 484 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 CYB5D2Q8WUJ1 264 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 P2RY13Q9BPV8 354 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 SLC25A37Q9NYZ2 338 aa18.09■□□□□ 0.49
PRPF40B-208ENST00000548436 KCNE1BA0A087WTH5 132 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 KIAA0355O15063 1070 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 SGTAO43765 313 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 LDLRP01130 860 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 KRT6AP02538 564 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 KRT6BP04259 564 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 RPL10P27635 214 aaKnown RBP18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 SLC6A12P48065 614 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 KRT6CP48668 564 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 NEK2P51955 445 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 PTCHD3Q3KNS1 767 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 SLC36A3Q495N2 470 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 TTC23LQ6PF05 361 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 LRRC70Q7Z2Q7 622 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 GALNT13Q8IUC8 556 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 RMND5BQ96G75 393 aaPredicted RBP18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 ERVW-1Q9UQF0 538 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 DLGAP4Q9Y2H0 992 aa18.08■□□□□ 0.49
PRPF40B-208ENST00000548436 A0A1W2PQ67 120 aa18.08■□□□□ 0.48
PRPF40B-208ENST00000548436 TTC34A8MYJ7 566 aa18.08■□□□□ 0.48
PRPF40B-208ENST00000548436 GFYI3L273 518 aa18.08■□□□□ 0.48
PRPF40B-208ENST00000548436 LEFTY1O75610 366 aa18.08■□□□□ 0.48
PRPF40B-208ENST00000548436 IL6P05231 212 aa18.08■□□□□ 0.48
PRPF40B-208ENST00000548436 RHOP08100 348 aa18.08■□□□□ 0.48
PRPF40B-208ENST00000548436 MPC1LP0DKB6 136 aa18.08■□□□□ 0.48
PRPF40B-208ENST00000548436 CDH1P12830 882 aa18.08■□□□□ 0.48
PRPF40B-208ENST00000548436 MYF6P23409 242 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms