RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 PITPNM3Q9BZ71 974 aa11.55□□□□□ -0.56
TRAFD1-205ENST00000548277 GBA3Q9H227 469 aa11.55□□□□□ -0.56
TRAFD1-205ENST00000548277 TFB2MQ9H5Q4 396 aaKnown RBP11.55□□□□□ -0.56
TRAFD1-205ENST00000548277 TXLNGQ9NUQ3 528 aa11.55□□□□□ -0.56
TRAFD1-205ENST00000548277 TRHDEQ9UKU6 1024 aa11.55□□□□□ -0.56
TRAFD1-205ENST00000548277 TFR2Q9UP52 801 aa11.55□□□□□ -0.56
TRAFD1-205ENST00000548277 KLHL20Q9Y2M5 609 aa11.55□□□□□ -0.56
TRAFD1-205ENST00000548277 C17orf113A0A1B0GUU1 675 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 KLHL33A6NCF5 533 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 HACD1B0YJ81 288 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 ISM1B1AKI9 464 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 CFAP99D6REC4 459 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 CNOT3O75175 753 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 CRTAMO95727 393 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 ALPPP05187 535 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 PYGMP11217 842 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 UGT2B7P16662 529 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 ADRA1AP35348 466 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 CSE1LP55060 971 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 PRPSAP1Q14558 356 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 TAZQ16635 292 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 CYP2A13Q16696 494 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 ANKRD20A2Q5SQ80 823 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 ANKRD20A1Q5TYW2 823 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 ANKRD20A3Q5VUR7 823 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 SHISA6Q6ZSJ9 500 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 SERPINA9Q86WD7 417 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 RCOR2Q8IZ40 523 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 C2orf73Q8N5S3 287 aaPredicted RBP11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 TC2NQ8N9U0 490 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 CCDC110Q8TBZ0 833 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 PTERQ96BW5 349 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 ULK4Q96C45 1275 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 DNAJC1Q96KC8 554 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 OR2A14Q96R47 310 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 DPH2Q9BQC3 489 aaPredicted RBP11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 DHRS4Q9BTZ2 278 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 MVB12BQ9H7P6 319 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 ATP13A2Q9NQ11 1180 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 PIH1D1Q9NWS0 290 aaKnown RBP11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 SPHK1Q9NYA1 384 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 ZDHHC3Q9NYG2 299 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 ICKQ9UPZ9 632 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 ASF1AQ9Y294 204 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 PRSS21Q9Y6M0 314 aa11.54□□□□□ -0.56
TRAFD1-205ENST00000548277 ARHGAP10A1A4S6 786 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 KCNN4O15554 427 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 LRRTM2O43300 516 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 PSTPIP1O43586 416 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 HADHAP40939 763 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 OTUD4Q01804 1114 aaKnown RBP11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 MSLNQ13421 630 aaPredicted RBP11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 BOP1Q14137 746 aaKnown RBP11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 C1QL3Q5VWW1 255 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 ITPRIPL1Q6GPH6 555 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 DARS2Q6PI48 645 aaKnown RBP11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 PPP1R32Q7Z5V6 425 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 PARP9Q8IXQ6 854 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 TAB3Q8N5C8 712 aaPredicted RBP11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 ELMO1Q92556 727 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 KRT35Q92764 455 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 CNDP1Q96KN2 507 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 IP6K3Q96PC2 410 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 GBP5Q96PP8 586 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 TBL1YQ9BQ87 522 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 SMARCAL1Q9NZC9 954 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 CIDEBQ9UHD4 219 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 OSGIN2Q9Y236 505 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 AAR2Q9Y312 384 aaKnown RBP11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 AP1M2Q9Y6Q5 423 aa11.53□□□□□ -0.56
TRAFD1-205ENST00000548277 AGAP14A8MT82 685 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 ZSCAN9O15535 394 aaPredicted RBP11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 UMODP07911 640 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 CHRM5P08912 532 aaPredicted RBP11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 TPBGLP0DKB5 382 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 CTNNA2P26232 953 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 ACRV1P26436 265 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 GABRA4P48169 554 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 CD151P48509 253 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 ZNF140P52738 457 aaPredicted RBP11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 HADHBP55084 474 aaKnown RBP11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 EIF3EP60228 445 aaKnown RBP11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 SPA17Q15506 151 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 NKAIN1Q4KMZ8 207 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 CRB2Q5IJ48 1285 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 DENND5AQ6IQ26 1287 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 RHBDD2Q6NTF9 364 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 KCNMB4Q86W47 210 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 KATNAL2Q8IYT4 538 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 OR2Y1Q8NGV0 311 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 DNAJB14Q8TBM8 379 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 ACTL9Q8TC94 416 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 HEXDCQ8WVB3 486 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 UBE2Q2Q8WVN8 375 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 TM9SF4Q92544 642 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 C17orf62Q9BQA9 187 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 NDC1Q9BTX1 674 aa11.52□□□□□ -0.57
TRAFD1-205ENST00000548277 AP1M1Q9BXS5 423 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms