RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ARNT2Q9HBZ2 717 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 CASS4Q9NQ75 786 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 SPHK1Q9NYA1 384 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 IMPACTQ9P2X3 320 aa19.69■□□□□ 0.74
SSH1-207ENST00000547862 EPN1Q9Y6I3 576 aaPredicted RBP19.69■□□□□ 0.74
SSH1-207ENST00000547862 SEC16AO15027 2179 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 A1L4Q6 167 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 GRID2IPA4D2P6 1211 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 GOLGA6L9A6NEM1 432 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 H7C0S8 307 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 HCRTR1O43613 425 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 MSNP26038 577 aaKnown RBP19.68■□□□□ 0.74
SSH1-207ENST00000547862 SHMT2P34897 504 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 GDF10P55107 478 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 ZIC1Q15915 447 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 PAPD7Q5XG87 772 aaKnown RBP19.68■□□□□ 0.74
SSH1-207ENST00000547862 KCTD11Q693B1 232 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 UNC5AQ6ZN44 842 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 MED25Q71SY5 747 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 MRGPREQ86SM8 312 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 RBMXL3Q8N7X1 1067 aaKnown RBP19.68■□□□□ 0.74
SSH1-207ENST00000547862 TMEM102Q8N9M5 508 aaPredicted RBP19.68■□□□□ 0.74
SSH1-207ENST00000547862 Q8NA96 180 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 STYXQ8WUJ0 223 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 SPRTNQ9H040 489 aaPredicted RBP19.68■□□□□ 0.74
SSH1-207ENST00000547862 DHCR7Q9UBM7 475 aaKnown RBP19.68■□□□□ 0.74
SSH1-207ENST00000547862 NDOR1Q9UHB4 597 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 CDYLQ9Y232 598 aa19.68■□□□□ 0.74
SSH1-207ENST00000547862 REXO2Q9Y3B8 237 aaKnown RBP19.68■□□□□ 0.74
SSH1-207ENST00000547862 PTRH2Q9Y3E5 179 aaKnown RBP19.68■□□□□ 0.74
SSH1-207ENST00000547862 NBPF19A0A087WUL8 3843 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 SEMA7AO75326 666 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 FTH1P02794 183 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 CTSBP07858 339 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 CHRM5P08912 532 aaPredicted RBP19.67■□□□□ 0.74
SSH1-207ENST00000547862 HBQ1P09105 142 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 MSL3P1P0C860 447 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 RNF224P0DH78 156 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 FOLR3P41439 243 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 PARP6Q2NL67 630 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 P3H1Q32P28 736 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 ZNF385CQ66K41 422 aaPredicted RBP19.67■□□□□ 0.74
SSH1-207ENST00000547862 KIAA1328Q86T90 577 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 FAM20CQ8IXL6 584 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 ZNF655Q8N720 491 aaPredicted RBP19.67■□□□□ 0.74
SSH1-207ENST00000547862 SSC4DQ8WTU2 575 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 TMEM121Q9BTD3 319 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 SLC29A3Q9BZD2 475 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 LACRTQ9GZZ8 138 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 TXLNGQ9NUQ3 528 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 PLEKHB1Q9UF11 243 aaPredicted RBP19.67■□□□□ 0.74
SSH1-207ENST00000547862 CIDEBQ9UHD4 219 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 R3HDM2Q9Y2K5 976 aaKnown RBP19.67■□□□□ 0.74
SSH1-207ENST00000547862 PCDHGB7Q9Y5F8 929 aa19.67■□□□□ 0.74
SSH1-207ENST00000547862 PCM1Q15154 2024 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 A0A0J9YY10 115 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 ISM1B1AKI9 464 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 MASP2O00187 686 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 LIN7AO14910 233 aaPredicted RBP19.66■□□□□ 0.74
SSH1-207ENST00000547862 AP2A2O94973 939 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 FTCDO95954 541 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 NSG1P42857 185 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 RAD9BQ6WBX8 426 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 PEX26Q7Z412 305 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 TAX1BP1Q86VP1 789 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 TMTC1Q8IUR5 882 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 KLHDC8BQ8IXV7 354 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 OR52K1Q8NGK4 314 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.66■□□□□ 0.74
SSH1-207ENST00000547862 OR2A14Q96R47 310 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 C19orf43Q9BQ61 176 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 DPH2Q9BQC3 489 aaPredicted RBP19.66■□□□□ 0.74
SSH1-207ENST00000547862 IFT80Q9P2H3 777 aaPredicted RBP19.66■□□□□ 0.74
SSH1-207ENST00000547862 AMFRQ9UKV5 643 aa19.66■□□□□ 0.74
SSH1-207ENST00000547862 PRRC2CQ9Y520 2896 aaKnown RBP19.65■□□□□ 0.74
SSH1-207ENST00000547862 CCDC162PA2VCL2 907 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 TCP11X1B4DZS4 312 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 ZSCAN9O15535 394 aaPredicted RBP19.65■□□□□ 0.74
SSH1-207ENST00000547862 KRT86O43790 486 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 AP2A1O95782 977 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 FOXN2P32314 431 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 EIF2S3LQ2VIR3 472 aaKnown RBP19.65■□□□□ 0.74
SSH1-207ENST00000547862 TBC1D21Q8IYX1 336 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 UBL4BQ8N7F7 174 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 LRRC57Q8N9N7 239 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 DNAAF3Q8N9W5 541 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 LMNTD1Q8N9Z9 388 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 GLIS1Q8NBF1 620 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 TTC13Q8NBP0 860 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 PRR7Q8TB68 274 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 TCTN2Q96GX1 697 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 PANX2Q96RD6 677 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 DHRS4Q9BTZ2 278 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 KLHL20Q9Y2M5 609 aa19.65■□□□□ 0.74
SSH1-207ENST00000547862 TCRBV7S2A1N4TA0A589 114 aa19.64■□□□□ 0.73
SSH1-207ENST00000547862 OR1I1O60431 355 aa19.64■□□□□ 0.73
SSH1-207ENST00000547862 ZNF189O75820 626 aaPredicted RBP19.64■□□□□ 0.73
SSH1-207ENST00000547862 GSTM1P09488 218 aa19.64■□□□□ 0.73
SSH1-207ENST00000547862 OR56A5P0C7T3 313 aa19.64■□□□□ 0.73
SSH1-207ENST00000547862 PEBP1P30086 187 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms