RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 NT5MQ9NPB1 228 aa7.04□□□□□ -1.28
CHPT1-203ENST00000546873 KCNK9Q9NPC2 374 aa7.04□□□□□ -1.28
CHPT1-203ENST00000546873 INTS9Q9NV88 658 aaKnown RBP7.04□□□□□ -1.28
CHPT1-203ENST00000546873 NSMCE4AQ9NXX6 385 aa7.04□□□□□ -1.28
CHPT1-203ENST00000546873 UBA2Q9UBT2 640 aaPredicted RBP7.04□□□□□ -1.28
CHPT1-203ENST00000546873 ZNF180Q9UJW8 692 aa7.04□□□□□ -1.28
CHPT1-203ENST00000546873 CPQQ9Y646 472 aa7.04□□□□□ -1.28
CHPT1-203ENST00000546873 FAM169AQ9Y6X4 670 aa7.04□□□□□ -1.28
CHPT1-203ENST00000546873 OBSL1O75147 1896 aa7.04□□□□□ -1.28
CHPT1-203ENST00000546873 GPR179Q6PRD1 2367 aa7.04□□□□□ -1.28
CHPT1-203ENST00000546873 NYNRINQ9P2P1 1898 aaKnown RBP7.04□□□□□ -1.28
CHPT1-203ENST00000546873 HELZP42694 1942 aaKnown RBP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 TMEM120BA0PK00 339 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 ILVBLA1L0T0 632 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 FAM47DPA6NHR8 397 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 H0Y626 953 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 PEX1O43933 1283 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 PRAMEF11O60813 436 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 NDUFS2O75306 463 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 AVILO75366 819 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 CNTN5O94779 1100 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 USP1O94782 785 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 OLFM2O95897 454 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 MT-ND3P03897 115 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 HDCP19113 662 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 PRKCHP24723 683 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 AVPR1AP37288 418 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 C21orf58P58505 322 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 GPX6P59796 221 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 SLC7A9P82251 487 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 IL9RQ01113 521 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 ILF2Q12905 390 aaKnown RBP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 EFTUD2Q15029 972 aaKnown RBP eCLIP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 KBTBD12Q3ZCT8 623 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 FAM133BQ5BKY9 247 aaKnown RBP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 UBAP2Q5T6F2 1119 aaKnown RBP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 NADSYN1Q6IA69 706 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 ZNF534Q76KX8 674 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 MARK2Q7KZI7 788 aaKnown RBP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 TRABD2AQ86V40 505 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 BOLLQ8N9W6 283 aaKnown RBP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 SUMF1Q8NBK3 374 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 OR52K1Q8NGK4 314 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 SLC44A1Q8WWI5 657 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 ATP2A3Q93084 1043 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 IGSF8Q969P0 613 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 NACC2Q96BF6 587 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 CENPTQ96BT3 561 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 PRICKLE1Q96MT3 831 aaPredicted RBP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 FICDQ9BVA6 458 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 POMKQ9H5K3 350 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 TLE6Q9H808 572 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 ZNF334Q9HCZ1 680 aaPredicted RBP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 MAN1C1Q9NR34 630 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 KCTD5Q9NXV2 234 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 CTNNAL1Q9UBT7 734 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 AGO1Q9UL18 857 aaKnown RBP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 ZFP37Q9Y6Q3 630 aaPredicted RBP7.03□□□□□ -1.28
CHPT1-203ENST00000546873 RPS6KL1Q9Y6S9 549 aa7.03□□□□□ -1.28
CHPT1-203ENST00000546873 OTOGLQ3ZCN5 2332 aa7.02□□□□□ -1.28
CHPT1-203ENST00000546873 DOCK4Q8N1I0 1966 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 ANKRD11Q6UB99 2663 aaPredicted RBP7.02□□□□□ -1.29
CHPT1-203ENST00000546873 FAM237BA0A1B0GVD1 139 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 KLHL33A6NCF5 533 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 FAM159BA6NKW6 160 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 NDUFAB1O14561 156 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 ZNF197O14709 1029 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 TM9SF1O15321 606 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 CCL16O15467 120 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 PRPF4O43172 522 aaKnown RBP eCLIP7.02□□□□□ -1.29
CHPT1-203ENST00000546873 TBL1XO60907 577 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 PMPCBO75439 489 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 ZWINTO95229 277 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 LUC7L3O95232 432 aaKnown RBP7.02□□□□□ -1.29
CHPT1-203ENST00000546873 FGF1P05230 155 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 SERPINF2P08697 491 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 SNRPAP09012 282 aaKnown RBP7.02□□□□□ -1.29
CHPT1-203ENST00000546873 POU2F2P09086 479 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 CHN1P15882 459 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 HLA-DPA1P20036 260 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 SLC6A4P31645 630 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 CD86P42081 329 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 CLCN4P51793 760 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 DMWDQ09019 674 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 FRG1Q14331 258 aaKnown RBP7.02□□□□□ -1.29
CHPT1-203ENST00000546873 SPARCL1Q14515 664 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 UGP2Q16851 508 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 GEN1Q17RS7 908 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 MPPE1Q53F39 396 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 TNFAIP8L3Q5GJ75 292 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 KCTD11Q693B1 232 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 PDPK2PQ6A1A2 396 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 ANKRD54Q6NXT1 300 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 RFWD3Q6PCD5 774 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 MICALCLQ6ZW33 695 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 NLRP9Q7RTR0 991 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 EXOC3L1Q86VI1 746 aa7.02□□□□□ -1.29
CHPT1-203ENST00000546873 TMC8Q8IU68 726 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms