RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 SCLYQ96I15 445 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 CIPCQ9C0C6 399 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 ZYG11BQ9C0D3 744 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 ATP13A3Q9H7F0 1226 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 ATP13A1Q9HD20 1204 aa14.38□□□□□ -0.11
HOXC11-202ENST00000546378 ZNF490Q9ULM2 529 aaPredicted RBP14.38□□□□□ -0.11
HOXC11-202ENST00000546378 PSMD3O43242 534 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 KRT75O95678 551 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 DCKP27707 260 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 AKT1P31749 480 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 HK3P52790 923 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 MVKQ03426 396 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 DPY19L1Q2PZI1 675 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 XAF1Q6GPH4 301 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 LCN8Q6JVE9 175 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 ZNF280BQ86YH2 543 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 HID1Q8IV36 788 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 SCML4Q8N228 414 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 OR13F1Q8NGS4 319 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 TSEN34Q9BSV6 310 aaKnown RBP14.37□□□□□ -0.11
HOXC11-202ENST00000546378 GDAP2Q9NXN4 497 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 FBXO10Q9UK96 956 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 PRAMEF12O95522 483 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 PIM1P11309 404 aaPredicted RBP14.37□□□□□ -0.11
HOXC11-202ENST00000546378 CKBP12277 381 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 ZNF12P17014 697 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 DNAJB13P59910 316 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 MS4A13Q5J8X5 152 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 INTS11Q5TA45 600 aaKnown RBP14.37□□□□□ -0.11
HOXC11-202ENST00000546378 Q6ZSR9 355 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 C2orf73Q8N5S3 287 aaPredicted RBP14.37□□□□□ -0.11
HOXC11-202ENST00000546378 CITED4Q96RK1 184 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 ABCC13Q9NSE7 274 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 OLA1Q9NTK5 396 aaKnown RBP14.37□□□□□ -0.11
HOXC11-202ENST00000546378 MALT1Q9UDY8 824 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 CD84Q9UIB8 345 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 ANK1P16157 1881 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 UGT2B4P06133 528 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 MED22Q15528 200 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 KLHL17Q6TDP4 642 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 MTERF1Q99551 399 aaKnown RBP14.37□□□□□ -0.11
HOXC11-202ENST00000546378 COQ3Q9NZJ6 369 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 ABCG2Q9UNQ0 655 aa14.37□□□□□ -0.11
HOXC11-202ENST00000546378 FCF1Q9Y324 198 aaKnown RBP14.37□□□□□ -0.11
HOXC11-202ENST00000546378 ELOVL7A1L3X0 281 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 ZNF99A8MXY4 864 aaPredicted RBP14.36□□□□□ -0.11
HOXC11-202ENST00000546378 ALPLP05186 524 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 TGM4P49221 684 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 RAB25P57735 213 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 DBPQ10586 325 aaPredicted RBP14.36□□□□□ -0.11
HOXC11-202ENST00000546378 SMARCB1Q12824 385 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 ARHGEF6Q15052 776 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 KDELC1Q6UW63 502 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 CEP68Q76N32 757 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 ZDHHC21Q8IVQ6 265 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 MINDY1Q8N5J2 469 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 UBASH3BQ8TF42 649 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 SLC13A3Q8WWT9 602 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 MYLIPQ8WY64 445 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 NSMCE3Q96MG7 304 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 SEPT3Q9UH03 358 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 CACNA1CQ13936 2221 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 SZT2Q5T011 3432 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 DYTNA2CJ06 578 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 SAP18O00422 153 aaKnown RBP14.36□□□□□ -0.11
HOXC11-202ENST00000546378 AQP9O43315 295 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 RPP40O75818 363 aaKnown RBP14.36□□□□□ -0.11
HOXC11-202ENST00000546378 PAPSS2O95340 614 aaPredicted RBP14.36□□□□□ -0.11
HOXC11-202ENST00000546378 CSF2P04141 144 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 HTR1AP08908 422 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 RAP2AP10114 183 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 IFI30P13284 250 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 ADRA1AP35348 466 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 GP2P55259 537 aaKnown RBP14.36□□□□□ -0.11
HOXC11-202ENST00000546378 ZNF846Q147U1 533 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 TTC23Q5W5X9 447 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 OR4F3Q6IEY1 312 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 PRMT9Q6P2P2 845 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 CARNMT1Q8N4J0 409 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 DBF4BQ8NFT6 615 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 FAM193BQ96PV7 902 aaPredicted RBP14.36□□□□□ -0.11
HOXC11-202ENST00000546378 SCUBE2Q9NQ36 999 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 CTPS2Q9NRF8 586 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 RAPGEFL1Q9UHV5 662 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 PADI4Q9UM07 663 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 MYO15AQ9UKN7 3530 aa14.36□□□□□ -0.11
HOXC11-202ENST00000546378 TACR1P25103 407 aa14.35□□□□□ -0.11
HOXC11-202ENST00000546378 WEE1P30291 646 aa14.35□□□□□ -0.11
HOXC11-202ENST00000546378 SERPINB10P48595 397 aa14.35□□□□□ -0.11
HOXC11-202ENST00000546378 GATMP50440 423 aa14.35□□□□□ -0.11
HOXC11-202ENST00000546378 ARHGDIAP52565 204 aa14.35□□□□□ -0.11
HOXC11-202ENST00000546378 RPL26P61254 145 aaKnown RBP14.35□□□□□ -0.11
HOXC11-202ENST00000546378 DUSP4Q13115 394 aa14.35□□□□□ -0.11
HOXC11-202ENST00000546378 IRF5Q13568 498 aa14.35□□□□□ -0.11
HOXC11-202ENST00000546378 NIPAL1Q6NVV3 410 aa14.35□□□□□ -0.11
HOXC11-202ENST00000546378 ALKAL1Q6UXT8 129 aa14.35□□□□□ -0.11
HOXC11-202ENST00000546378 CELF2-AS1Q8N7Q2 184 aa14.35□□□□□ -0.11
HOXC11-202ENST00000546378 TMEM203Q969S6 136 aa14.35□□□□□ -0.11
HOXC11-202ENST00000546378 GTPBP3Q969Y2 492 aaKnown RBP14.35□□□□□ -0.11
HOXC11-202ENST00000546378 ATOH8Q96SQ7 321 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms