RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 MTPNP58546 118 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 TUBA4AP68366 448 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL4A6-209ENST00000545689 CYS1Q717R9 158 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 SIAH1Q8IUQ4 282 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 CD84Q9UIB8 345 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 E7ESA3 106 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 KDELR3O43731 214 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 CYP11A1P05108 521 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 GMFBP60983 142 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 BRAT1Q6PJG6 821 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 FAM180AQ6UWF9 173 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 RGL4Q8IZJ4 473 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 CHCHD4Q8N4Q1 142 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 OR52B2Q96RD2 323 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 HTATIP2Q9BUP3 242 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 EHD1Q9H4M9 534 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 SUV39H2Q9H5I1 410 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 E7ENX8 843 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 BTN3A3O00478 584 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 AHSGP02765 367 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 ZNF30P17039 623 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 CLCN2P51788 898 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 SERINC3Q13530 473 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 IL18Q14116 193 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 UBXN11Q5T124 520 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 ATXN7L2Q5T6C5 722 aaPredicted RBP12.29□□□□□ -0.44
COL4A6-209ENST00000545689 TMEM214Q6NUQ4 689 aaKnown RBP12.29□□□□□ -0.44
COL4A6-209ENST00000545689 ZNF563Q8TA94 476 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 ZUFSPQ96AP4 578 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 C1orf74Q96LT6 269 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 BRINP2Q9C0B6 783 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 ANKHQ9HCJ1 492 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 SIX4Q9UIU6 781 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 CLDN4O14493 209 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 OR1F1O43749 312 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 EPHX1P07099 455 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 CRISP3P54108 245 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 SLC10A7Q0GE19 358 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 TCEAL5Q5H9L2 206 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 KIAA1191Q96A73 305 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 TUBGCP5Q96RT8 1024 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 PDCD10Q9BUL8 212 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 TRPV5Q9NQA5 729 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 NFKBIL1Q9UBC1 381 aaPredicted RBP12.29□□□□□ -0.44
COL4A6-209ENST00000545689 ZDHHC2Q9UIJ5 367 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 hCG_2039718K7EN88 272 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 PIRO00625 290 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 AP2A2O94973 939 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 AGR2O95994 175 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 EPOP01588 193 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 CLCN4P51793 760 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 GRB14Q14449 540 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 FAM156AQ8NDB6 213 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 DNASE1L2Q92874 299 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 DIRAS2Q96HU8 199 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 TLE6Q9H808 572 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 MOV10Q9HCE1 1003 aaKnown RBP12.29□□□□□ -0.44
COL4A6-209ENST00000545689 ZNF358Q9NW07 568 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 VPS29Q9UBQ0 182 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 TESMINQ9Y4I5 508 aa12.29□□□□□ -0.44
COL4A6-209ENST00000545689 LCHNA4D1U4 455 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 PCDH7O60245 1069 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 SAGP10523 405 aaPredicted RBP12.28□□□□□ -0.44
COL4A6-209ENST00000545689 PROZP22891 400 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 SLC51AQ86UW1 340 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 RNASE11Q8TAA1 199 aaKnown RBP12.28□□□□□ -0.44
COL4A6-209ENST00000545689 PHF12Q96QT6 1004 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 COPS4Q9BT78 406 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 DGKBQ9Y6T7 804 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 EI24O14681 340 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 RHAGQ02094 409 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 SCARB2Q14108 478 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 ZNF792Q3KQV3 632 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 PLEKHG6Q3KR16 790 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 FBXO43Q4G163 708 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 PDSS2Q86YH6 399 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 GPR65Q8IYL9 337 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 LRRC15Q8TF66 581 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 NR4A3Q92570 626 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 UFD1Q92890 307 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 FAM240BA0A1B0GVZ2 78 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 NRP1O14786 923 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 CA12O43570 354 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 PRSS55Q6UWB4 352 aaPredicted RBP12.28□□□□□ -0.44
COL4A6-209ENST00000545689 ERMP1Q7Z2K6 904 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 OR10H5Q8NGA6 315 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 EQTNQ9NQ60 294 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 SPATA7Q9P0W8 599 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 SLC17A6Q9P2U8 582 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 POFUT2Q9Y2G5 429 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 PEX10O60683 326 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 CCNKO75909 580 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 XRCC1P18887 633 aaPredicted RBP12.28□□□□□ -0.44
COL4A6-209ENST00000545689 RHDQ02161 417 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 KCNC3Q14003 757 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 DUOXA1Q1HG43 343 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 ZFP69Q49AA0 526 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 PSRC1Q6PGN9 363 aaPredicted RBP12.28□□□□□ -0.44
COL4A6-209ENST00000545689 DCBLD1Q8N8Z6 715 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms