RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 CLDN24A6NM45 220 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 TMEM189-UBE2V1I3L0A0 370 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 PRMT5O14744 637 aaPredicted RBP8.57□□□□□ -1.04
TDP1-204ENST00000545686 WNT9AO14904 365 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 FFAR2O15552 330 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 OR1I1O60431 355 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 PRLP01236 227 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 CNPP09543 421 aaKnown RBP8.57□□□□□ -1.04
TDP1-204ENST00000545686 CTSHP09668 335 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 OR4Q2P0C623 313 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 NR4A1P22736 598 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 GNPDA1P46926 289 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 CDKN1CP49918 316 aaPredicted RBP8.57□□□□□ -1.04
TDP1-204ENST00000545686 GZMMP51124 257 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 IFITM3Q01628 133 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 VAC14Q08AM6 782 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 ABHD18Q0P651 414 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 CLCA4Q14CN2 919 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 DDR2Q16832 855 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 ZRANB3Q5FWF4 1079 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 SPANXN4Q5MJ08 99 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 NADSYN1Q6IA69 706 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 TUBA3EQ6PEY2 450 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 CYP2U1Q7Z449 544 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 SERINC5Q86VE9 423 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 ELMOD1Q8N336 334 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 KIAA1958Q8N8K9 716 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 CNIH3Q8TBE1 160 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 FRS2Q8WU20 508 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 FBXO32Q969P5 355 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 BTBD2Q9BX70 525 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 ADGRE3Q9BY15 652 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 NACA2Q9H009 215 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 KCNH6Q9H252 994 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 SCUBE2Q9NQ36 999 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 THG1LQ9NWX6 298 aaKnown RBP8.57□□□□□ -1.04
TDP1-204ENST00000545686 SAMD4AQ9UPU9 718 aaKnown RBP8.57□□□□□ -1.04
TDP1-204ENST00000545686 OARD1Q9Y530 152 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 PCDHB5Q9Y5E4 795 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 PMF1-BGLAPU3KQ54 211 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 SLC12A8A0AV02 714 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 SAGE2PA6NJ88 616 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 TTC34A8MYJ7 566 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 PER2O15055 1255 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 STX7O15400 261 aaKnown RBP8.57□□□□□ -1.04
TDP1-204ENST00000545686 RGS10O43665 173 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 KDELR3O43731 214 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 XPNPEP2O43895 674 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 FKBP9O95302 570 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 SERPINA1P01009 418 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 BMP1P13497 986 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 HOXB9P17482 250 aaPredicted RBP8.57□□□□□ -1.04
TDP1-204ENST00000545686 FUT4P22083 530 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 CD6P30203 668 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 ARHGDIAP52565 204 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 PPP5CP53041 499 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 CACNG1Q06432 222 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 NPTX1Q15818 432 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 C10orf120Q5SQS8 335 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 ANKRD34AQ69YU3 496 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 KDM4DQ6B0I6 523 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 MSANTD1Q6ZTZ1 278 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 MIB1Q86YT6 1006 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 PGBD3Q8N328 593 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 TMEM132CQ8N3T6 1108 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 LIX1Q8N485 282 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 IPCEF1Q8WWN9 437 aaPredicted RBP8.57□□□□□ -1.04
TDP1-204ENST00000545686 FAM120BQ96EK7 910 aaKnown RBP8.57□□□□□ -1.04
TDP1-204ENST00000545686 OR52E6Q96RD3 313 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 HBEGFQ99075 208 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 CORO1BQ9BR76 489 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 TBCDQ9BTW9 1192 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 SLC29A3Q9BZD2 475 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 LRTM1Q9HBL6 345 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 TM9SF3Q9HD45 589 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 FLRT1Q9NZU1 646 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 ERVK-18Q9QC07 812 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 OSGIN1Q9UJX0 560 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 PADI3Q9ULW8 664 aa8.57□□□□□ -1.04
TDP1-204ENST00000545686 TOR1BO14657 336 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 CCNDBP1O95273 360 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 FTH1P02794 183 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 PFKLP17858 780 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 RPS3P23396 243 aaKnown RBP eCLIP8.56□□□□□ -1.04
TDP1-204ENST00000545686 EIF2DP41214 584 aaKnown RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 RGRP47804 291 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 GPR15P49685 360 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 RGS4P49798 205 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 CSNK2BP67870 215 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 TUBA1BP68363 451 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 PLIN5Q00G26 463 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 PLEKHG6Q3KR16 790 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 TTLL9Q3SXZ7 439 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 PAGE2BQ5JRK9 111 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 C1QTNF12Q5T7M4 302 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 DEPDC1Q5TB30 811 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 SDHAF4Q5VUM1 108 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 GDF6Q6KF10 455 aaPredicted RBP8.56□□□□□ -1.04
TDP1-204ENST00000545686 CERS6Q6ZMG9 384 aa8.56□□□□□ -1.04
TDP1-204ENST00000545686 GCNT7Q6ZNI0 430 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms