RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 MAGEC3Q8TD91 643 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 JPH3Q8WXH2 748 aaPredicted RBP11.46□□□□□ -0.57
HDAC4-216ENST00000544989 SLC39A7Q92504 469 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 SLC22A18Q96BI1 424 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 SLC45A3Q96JT2 553 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 PITPNM3Q9BZ71 974 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 CHRNA10Q9GZZ6 450 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 P2RY12Q9H244 342 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 APMAPQ9HDC9 416 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 FGF21Q9NSA1 209 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 KCND1Q9NSA2 647 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 MARCH4Q9P2E8 410 aaPredicted RBP11.46□□□□□ -0.57
HDAC4-216ENST00000544989 KCND3Q9UK17 655 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 COMMD10Q9Y6G5 202 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 RPS6KL1Q9Y6S9 549 aa11.46□□□□□ -0.57
HDAC4-216ENST00000544989 PIPSLA2A3N6 862 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 BTN3A1O00481 513 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 ZNF185O15231 689 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 AVILO75366 819 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 TMEM63AO94886 807 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 FKBP9O95302 570 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 FOLR1P15328 257 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 ARNTP27540 789 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 PRDX3P30048 256 aaKnown RBP11.45□□□□□ -0.58
HDAC4-216ENST00000544989 STAT5AP42229 794 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 TERF1P54274 439 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 EIF3BP55884 814 aaKnown RBP11.45□□□□□ -0.58
HDAC4-216ENST00000544989 PPP1CAP62136 330 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 PRKG2Q13237 762 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 KIR2DS3Q14952 304 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 LONRF1Q17RB8 773 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 RNASEH2BQ5TBB1 312 aaKnown RBP11.45□□□□□ -0.58
HDAC4-216ENST00000544989 SPESP1Q6UW49 350 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 ADGRF3Q8IZF5 1079 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 OR5AR1Q8NGP9 310 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 SEC14L1Q92503 715 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 LPGAT1Q92604 370 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 ZNF669Q96BR6 464 aaPredicted RBP11.45□□□□□ -0.58
HDAC4-216ENST00000544989 FAM167BQ9BTA0 163 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 CCDC68Q9H2F9 335 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 ACTR10Q9NZ32 417 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 KLHL42Q9P2K6 505 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 LNPEPQ9UIQ6 1025 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 PADI1Q9ULC6 663 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 TDRKHQ9Y2W6 561 aaKnown RBP11.45□□□□□ -0.58
HDAC4-216ENST00000544989 MAD1L1Q9Y6D9 718 aa11.45□□□□□ -0.58
HDAC4-216ENST00000544989 USP27XA6NNY8 438 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 C21orf140B9A014 251 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 E5RI56 91 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 GOLGA8MH3BSY2 632 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 BTN3A3O00478 584 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 DNALI1O14645 258 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-216ENST00000544989 CPNE3O75131 537 aaKnown RBP11.44□□□□□ -0.58
HDAC4-216ENST00000544989 C1QL1O75973 258 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 KIAA0754O94854 1291 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 RECKO95980 971 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 CHRM5P08912 532 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-216ENST00000544989 HBQ1P09105 142 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 EBLN1P0CF75 366 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 LIFP15018 202 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 ITGB6P18564 788 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 PGAM1P18669 254 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 RAB28P51157 221 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 DR1Q01658 176 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 MORF4L2Q15014 288 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 KYNUQ16719 465 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 TTLL9Q3SXZ7 439 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 ZNF470Q6ECI4 717 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 CES3Q6UWW8 571 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 UNC5AQ6ZN44 842 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 LDB1Q86U70 411 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-216ENST00000544989 CREG2Q8IUH2 290 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 TMEM126BQ8IUX1 230 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 TTC9Q92623 222 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 N4BP2L2Q92802 583 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-216ENST00000544989 RAD51AP1Q96B01 352 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 TCTN2Q96GX1 697 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 BIRC8Q96P09 236 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 ARHGAP9Q9BRR9 750 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 DDX47Q9H0S4 455 aaKnown RBP11.44□□□□□ -0.58
HDAC4-216ENST00000544989 INTS7Q9NVH2 962 aaKnown RBP11.44□□□□□ -0.58
HDAC4-216ENST00000544989 SERTAD3Q9UJW9 196 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 ICKQ9UPZ9 632 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 CDYLQ9Y232 598 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 PCDHB3Q9Y5E6 796 aa11.44□□□□□ -0.58
HDAC4-216ENST00000544989 A0A0J9YY10 115 aa11.43□□□□□ -0.58
HDAC4-216ENST00000544989 ZCWPW2A0A1B0GU75 182 aa11.43□□□□□ -0.58
HDAC4-216ENST00000544989 SLC9B1P1A6NJY1 282 aa11.43□□□□□ -0.58
HDAC4-216ENST00000544989 IQCF5A8MTL0 148 aa11.43□□□□□ -0.58
HDAC4-216ENST00000544989 S1PR4O95977 384 aa11.43□□□□□ -0.58
HDAC4-216ENST00000544989 PKMP14618 531 aaKnown RBP11.43□□□□□ -0.58
HDAC4-216ENST00000544989 CHRM3P20309 590 aa11.43□□□□□ -0.58
HDAC4-216ENST00000544989 PKLRP30613 574 aa11.43□□□□□ -0.58
HDAC4-216ENST00000544989 FMO4P31512 558 aa11.43□□□□□ -0.58
HDAC4-216ENST00000544989 CSE1LP55060 971 aaKnown RBP11.43□□□□□ -0.58
HDAC4-216ENST00000544989 C19orf57Q0VDD7 668 aa11.43□□□□□ -0.58
HDAC4-216ENST00000544989 KCNAB1Q14722 419 aa11.43□□□□□ -0.58
HDAC4-216ENST00000544989 NAA25Q14CX7 972 aa11.43□□□□□ -0.58
HDAC4-216ENST00000544989 SLC5A12Q1EHB4 618 aa11.43□□□□□ -0.58
HDAC4-216ENST00000544989 TIPARPQ7Z3E1 657 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms