RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 ZC3HC1Q86WB0 502 aaKnown RBP5.17□□□□□ -1.58
USP28-213ENST00000544967 RALGPS2Q86X27 583 aaPredicted RBP5.17□□□□□ -1.58
USP28-213ENST00000544967 PSTKQ8IV42 348 aaKnown RBP5.17□□□□□ -1.58
USP28-213ENST00000544967 KLHDC8BQ8IXV7 354 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 TMEM86AQ8N2M4 240 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 CLIP4Q8N3C7 705 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 EFHBQ8N7U6 833 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 ANKRD53Q8N9V6 530 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 TXNDC5Q8NBS9 432 aaKnown RBP5.17□□□□□ -1.58
USP28-213ENST00000544967 ZNF555Q8NEP9 628 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 TMEM80Q96HE8 168 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 TBATAQ96M53 351 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 KCTD14Q9BQ13 255 aaPredicted RBP5.17□□□□□ -1.58
USP28-213ENST00000544967 MRPL57Q9BQC6 102 aaKnown RBP5.17□□□□□ -1.58
USP28-213ENST00000544967 GABARAPL1Q9H0R8 117 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 ZNF576Q9H609 170 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 CRLF2Q9HC73 371 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 ZFP14Q9HCL3 533 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 SPG21Q9NZD8 308 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 IL37Q9NZH6 218 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 MAGEL2Q9UJ55 1249 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 VANGL2Q9ULK5 521 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 TPRKBQ9Y3C4 175 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 MSRB2Q9Y3D2 182 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 PCDHA9Q9Y5H5 950 aa5.17□□□□□ -1.58
USP28-213ENST00000544967 A0A075B6Q4 140 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 A0A087X1B8 175 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 A0A0A0MRY4 1105 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 CACNB4O00305 520 aaPredicted RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 SLC9A3R1O14745 358 aaPredicted RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 NRP1O14786 923 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 ARPC2O15144 300 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 CDK14O94921 469 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 GOT2P00505 430 aaKnown RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 APRTP07741 180 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 NFICP08651 508 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 IL7P13232 177 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 CYP2A7P20853 494 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 MIPP30301 263 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 GATMP50440 423 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 MRPS15P82914 257 aaKnown RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 KEAP1Q14145 624 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 UGP2Q16851 508 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 DPY19L1Q2PZI1 675 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 ADPRMQ3LIE5 342 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 PAGE2BQ5JRK9 111 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 ZNF691Q5VV52 312 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 CNSTQ6PJW8 725 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 GLRX5Q86SX6 157 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 NOXA1Q86UR1 476 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 CNTN4Q8IWV2 1026 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 SYTL1Q8IYJ3 562 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 AMER2Q8N7J2 671 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 POC5Q8NA72 575 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 ZSCAN18Q8TBC5 510 aaPredicted RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 LRRN4Q8WUT4 740 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 RORBQ92753 470 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 HSFY1Q96LI6 401 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 SPATA13Q96N96 652 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 CCDC115Q96NT0 180 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 PSKH2Q96QS6 385 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 SIGLEC11Q96RL6 698 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 COQ7Q99807 217 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 RBM4BQ9BQ04 359 aaKnown RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 TMEM246Q9BRR3 403 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 UQCC2Q9BRT2 126 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 RBM4Q9BWF3 364 aaKnown RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 WDR55Q9H6Y2 383 aaPredicted RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 RPF1Q9H9Y2 349 aaKnown RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 APOBEC3GQ9HC16 384 aaKnown RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 PTTG3PQ9NZH4 202 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 ATPIF1Q9UII2 106 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 ZDHHC2Q9UIJ5 367 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 INTS6Q9UL03 887 aaKnown RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 CHD5Q8TDI0 1954 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 TRIM77I1YAP6 450 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 ERVH48-1M5A8F1 160 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 SLC1A7O00341 560 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 NME4O00746 187 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 ARHGAP33O14559 1287 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 SLC7A4O43246 635 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 PIAS1O75925 651 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 FGF18O76093 207 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 STMN1P16949 149 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 NR4A1P22736 598 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 ASPAP45381 313 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 GLUD2P49448 558 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 SCNN1GP51170 649 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 SLC7A2P52569 658 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 OR2B6P58173 313 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.16□□□□□ -1.58
USP28-213ENST00000544967 TMEM132DQ14C87 1099 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 POLD3Q15054 466 aaPredicted RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 MLIPQ5VWP3 458 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 RETSATQ6NUM9 610 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 GK5Q6ZS86 529 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 STRADAQ7RTN6 431 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 TMEM173Q86WV6 379 aaPredicted RBP5.16□□□□□ -1.58
USP28-213ENST00000544967 XYLT1Q86Y38 959 aa5.16□□□□□ -1.58
USP28-213ENST00000544967 METTL4Q8N3J2 472 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms