RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 POLMQ9NP87 494 aaPredicted RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 IFT80Q9P2H3 777 aaPredicted RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 FETUBQ9UGM5 382 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 XKRYO14609 159 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 RPL10P27635 214 aaKnown RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 GKP32189 559 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 CCR3P51677 355 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 RIPK1Q13546 671 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 QPRTQ15274 297 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 GPR33Q49SQ1 333 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 TAS1R3Q7RTX0 852 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 ZNF280BQ86YH2 543 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 DGCR14Q96DF8 476 aaKnown RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 ZNF570Q96NI8 536 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 TMEM209Q96SK2 561 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 FEM1AQ9BSK4 669 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 DNAJB4Q9UDY4 337 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 ZNF222Q9UK12 451 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 DMTF1Q9Y222 760 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 SLC22A14Q9Y267 594 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 KAT6AQ92794 2004 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 MTMR11A4FU01 709 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 ANKRD66B4E2M5 251 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 NME6O75414 186 aaPredicted RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 FSHRP23945 695 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 HCAR3P49019 387 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 AQP4P55087 323 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 PDE12Q6L8Q7 609 aaKnown RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 PHC3Q8NDX5 983 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 FAR1Q8WVX9 515 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 TRMT61BQ9BVS5 477 aaKnown RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 MUC13Q9H3R2 512 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 MARCH7Q9H992 704 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 MTRRQ9UBK8 725 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 SLC45A1Q9Y2W3 748 aa12.57□□□□□ -0.4
CHD4-211ENST00000544484 GPC6Q9Y625 555 aaPredicted RBP12.57□□□□□ -0.4
CHD4-211ENST00000544484 RGPD8O14715 1765 aaPredicted RBP12.56□□□□□ -0.4
CHD4-211ENST00000544484 FAM159BA6NKW6 160 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 HNMTP50135 292 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 FAM131AQ6UXB0 335 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 ZC3HC1Q86WB0 502 aaKnown RBP12.56□□□□□ -0.4
CHD4-211ENST00000544484 GIPC3Q8TF64 312 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 WDR60Q8WVS4 1066 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 SLC35G5Q96KT7 338 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 GINS4Q9BRT9 223 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 COQ10BQ9H8M1 238 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 AKTIPQ9H8T0 292 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 NECTIN3Q9NQS3 549 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 TELO2Q9Y4R8 837 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 ABCC6O95255 1503 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 PDPK1O15530 556 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 AP2A2O94973 939 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 GIMD1P0DJR0 217 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 IL7RP16871 459 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 CCNHP51946 323 aaPredicted RBP12.56□□□□□ -0.4
CHD4-211ENST00000544484 NPY6RQ99463 290 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 LOC110117498-PIK3R3F6TDL0 507 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 TAF4O00268 1085 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 DLX3O60479 287 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 ERVK-8P63133 956 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 PRKD1Q15139 912 aaPredicted RBP12.56□□□□□ -0.4
CHD4-211ENST00000544484 PCBP2Q15366 365 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHD4-211ENST00000544484 TEAD2Q15562 447 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 NEK7Q8TDX7 302 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 WFIKKN2Q8TEU8 576 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 AP3S1Q92572 193 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 SLCO2A1Q92959 643 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 JSRP1Q96MG2 331 aaPredicted RBP12.56□□□□□ -0.4
CHD4-211ENST00000544484 PDCD10Q9BUL8 212 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 TDP1Q9NUW8 608 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 DNAAF2Q9NVR5 837 aaKnown RBP12.56□□□□□ -0.4
CHD4-211ENST00000544484 ZDHHC2Q9UIJ5 367 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 C9P02748 559 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 LYNP07948 512 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 DGKQP52824 942 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 GPR17Q13304 367 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 SLC9A4Q6AI14 798 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 PQLC3Q8N755 202 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 OMA1Q96E52 524 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 NEK6Q9HC98 313 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 NKIRAS2Q9NYR9 191 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 ADAMDEC1O15204 470 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 CLCNKAP51800 687 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 DGKEP52429 567 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 DMPKQ09013 629 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 GANABQ14697 944 aaKnown RBP12.56□□□□□ -0.4
CHD4-211ENST00000544484 ADGRG6Q86SQ4 1221 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 TTC29Q8NA56 475 aaPredicted RBP12.56□□□□□ -0.4
CHD4-211ENST00000544484 TMEM145Q8NBT3 493 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 OR5AK3PQ8NH89 298 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 DDX1Q92499 740 aaKnown RBP12.56□□□□□ -0.4
CHD4-211ENST00000544484 COX4I2Q96KJ9 171 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 CHCHD6Q9BRQ6 235 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 ELOVL2Q9NXB9 296 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 TEX264Q9Y6I9 313 aa12.56□□□□□ -0.4
CHD4-211ENST00000544484 STX16-NPEPL1H3BU86 382 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 AHCYL1O43865 530 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 MMP20O60882 483 aa12.55□□□□□ -0.4
CHD4-211ENST00000544484 ECDO95905 644 aaPredicted RBP12.55□□□□□ -0.4
CHD4-211ENST00000544484 INCA1Q0VD86 236 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms