RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.24□□□□□ -0.29
SP140-213ENST00000543928 LGSNQ5TDP6 509 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 USP53Q70EK8 1073 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 DGLUCYQ7Z3D6 616 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 RASGRP3Q8IV61 690 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 MYRIPQ8NFW9 859 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 OR4E2Q8NGC2 313 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 OR2W6PQ8NHA6 318 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 WDR48Q8TAF3 677 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 MAGEC3Q8TD91 643 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 ASB11Q8WXH4 323 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 RAD51AP1Q96B01 352 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 PDLIM5Q96HC4 596 aaKnown RBP13.24□□□□□ -0.29
SP140-213ENST00000543928 GFM1Q96RP9 751 aaKnown RBP13.24□□□□□ -0.29
SP140-213ENST00000543928 ZMYND15Q9H091 742 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 SRMSQ9H3Y6 488 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 EPB41L1Q9H4G0 881 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 TFB2MQ9H5Q4 396 aaKnown RBP13.24□□□□□ -0.29
SP140-213ENST00000543928 XKR8Q9H6D3 395 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 RDH14Q9HBH5 336 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 SNX15Q9NRS6 342 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 OGFRQ9NZT2 677 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 PSMC3IPQ9P2W1 217 aaPredicted RBP13.24□□□□□ -0.29
SP140-213ENST00000543928 ADAMTS6Q9UKP5 1117 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 ICKQ9UPZ9 632 aa13.24□□□□□ -0.29
SP140-213ENST00000543928 IQANK1A0A1B0GTG1 560 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 KRT87PA6NCN2 255 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 SMIM23A6NLE4 172 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 D6RAR5 112 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 GFYI3L273 518 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 ZBTB14O43829 449 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 KDM1AO60341 852 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 CPNE6O95741 557 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 C2P06681 752 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 C8GP07360 202 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 SNRPAP09012 282 aaKnown RBP13.23□□□□□ -0.29
SP140-213ENST00000543928 SLC35E2BP0CK96 405 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 CCDC166P0CW27 439 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 MAP4P27816 1152 aaKnown RBP13.23□□□□□ -0.29
SP140-213ENST00000543928 CSF2RBP32927 897 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 GMPRP36959 345 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 SLCO1A2P46721 670 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 CAPZBP47756 277 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 SP140Q13342 867 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 CSHL1Q14406 222 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 N4BP2L1Q5TBK1 243 aaPredicted RBP13.23□□□□□ -0.29
SP140-213ENST00000543928 HES3Q5TGS1 186 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 KLHL35Q6PF15 583 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 UBE2R2Q712K3 238 aaPredicted RBP13.23□□□□□ -0.29
SP140-213ENST00000543928 AMIGO1Q86WK6 493 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 SPATA6LQ8N4H0 392 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 EPS8L3Q8TE67 593 aaKnown RBP13.23□□□□□ -0.29
SP140-213ENST00000543928 ADAMTS14Q8WXS8 1223 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 NCSTNQ92542 709 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 RSC1A1Q92681 617 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 DLG3Q92796 817 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 NUDT22Q9BRQ3 303 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 UNKQ9C0B0 810 aaKnown RBP13.23□□□□□ -0.29
SP140-213ENST00000543928 PPCSQ9HAB8 311 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 CTNNAL1Q9UBT7 734 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 TBK1Q9UHD2 729 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 IKZF3Q9UKT9 509 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 DCHS1Q96JQ0 3298 aa13.23□□□□□ -0.29
SP140-213ENST00000543928 A0A087X1B8 175 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 A0A096LPK6 155 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 OR6C74A6NCV1 312 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 NPEPPSL1A6NEC2 478 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 OR5K3A6NET4 321 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 BTN3A3O00478 584 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 SLC16A5O15375 505 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 TCEA3O75764 348 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 SYF2O95926 243 aaKnown RBP13.22□□□□□ -0.29
SP140-213ENST00000543928 CYP2A7P20853 494 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 PKLRP30613 574 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 SHMT2P34897 504 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 MAGEA12P43365 314 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 CSRP3P50461 194 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 RAB28P51157 221 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 CFHR1Q03591 330 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 IFFO1Q0D2I5 559 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 SQSTM1Q13501 440 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 CLPPQ16740 277 aaPredicted RBP13.22□□□□□ -0.29
SP140-213ENST00000543928 TAF1BQ53T94 588 aaPredicted RBP13.22□□□□□ -0.29
SP140-213ENST00000543928 CDCP2Q5VXM1 449 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 RBM44Q6ZP01 1051 aaKnown RBP13.22□□□□□ -0.29
SP140-213ENST00000543928 TMPRSS9Q7Z410 1059 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 TBC1D1Q86TI0 1168 aaPredicted RBP13.22□□□□□ -0.29
SP140-213ENST00000543928 OOSP2Q86WS3 158 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 TDRPQ86YL5 185 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 FBXO15Q8NCQ5 510 aaPredicted RBP13.22□□□□□ -0.29
SP140-213ENST00000543928 OR9A1PQ8NGU1 263 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 ISL2Q96A47 359 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 MTBPQ96DY7 904 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 UBXN10Q96LJ8 280 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 IL17FQ96PD4 163 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 MENTQ9BUN1 341 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 SLC12A9Q9BXP2 914 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 DERL2Q9GZP9 239 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 HRASLS2Q9NWW9 162 aa13.22□□□□□ -0.29
SP140-213ENST00000543928 TLK1Q9UKI8 766 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms