RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	ARHGEF33	A8MVX0	844 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	GFY	I3L273	518 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	COPE	O14579	308 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	TNFSF14	O43557	240 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	OPA1	O60313	960 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	PSIP1	O75475	530 aa	Known RBP	9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	WISP3	O95389	354 aa	Predicted RBP	9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	GUCA1C	O95843	209 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	S100B	P04271	92 aa	Predicted RBP	9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	COL6A2	P12110	1019 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	TYRP1	P17643	537 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	KCNA4	P22459	653 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	FASLG	P48023	281 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	CCT5	P48643	541 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	KPNA2	P52292	529 aa	Known RBP	9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	OR1D5	P58170	312 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	DLG1	Q12959	904 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	SP140	Q13342	867 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	TSTA3	Q13630	321 aa	Predicted RBP	9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	GPR18	Q14330	331 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	TSN	Q15631	228 aa	Known RBP	9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	TRIP6	Q15654	476 aa	Known RBP	9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	TSNAXIP1	Q2TAA8	658 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	CCSMST1	Q4G0I0	132 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	ARMC6	Q6NXE6	501 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	ADAMTSL2	Q86TH1	951 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	C17orf82	Q86X59	251 aa	Predicted RBP	9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	GPSM1	Q86YR5	675 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	OR52E1	Q8NGJ3	308 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	OR9A1P	Q8NGU1	263 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	OR10G6	Q8NH81	332 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	STAG3L4	Q8TBR4	150 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	IFI44	Q8TCB0	444 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	MZB1	Q8WU39	189 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	ZFPM2	Q8WW38	1151 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	ANKRD7	Q92527	254 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	UBXN10	Q96LJ8	280 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	PKP4	Q99569	1192 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	EGFL8	Q99944	293 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	TBC1D10A	Q9BXI6	508 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	SLC12A9	Q9BXP2	914 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	IQCG	Q9H095	443 aa	Known RBP	9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	ABCG4	Q9H172	646 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	SRMS	Q9H3Y6	488 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	TFB2M	Q9H5Q4	396 aa	Known RBP	9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	XKR8	Q9H6D3	395 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	KIR3DX1	Q9H7L2	352 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	VIPAS39	Q9H9C1	493 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	ARL15	Q9NXU5	204 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	UTP6	Q9NYH9	597 aa	Known RBP	9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	EURL	Q9NYK6	297 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	DCDC2	Q9UHG0	476 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	ADAMTS6	Q9UKP5	1117 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	IKZF3	Q9UKT9	509 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	RNF112	Q9ULX5	631 aa		9.88	□□□□□ -0.83
CPSF7-221	ENST00000543545	LY6G6E	A0A0G2JKS1	128 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	OR6C74	A6NCV1	312 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	NCF1B	A6NI72	391 aa	Predicted RBP	9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	NCF1C	A8MVU1	366 aa	Predicted RBP	9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	SUPT3H	B4E1H0	165 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	CBFA2T3	O75081	653 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	SPAG7	O75391	227 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	SUPT3H	O75486	399 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	TOP3B	O95985	862 aa	Known RBP	9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	ENO2	P09104	434 aa	Predicted RBP	9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	RBP1	P09455	135 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	NCF1	P14598	390 aa	Predicted RBP	9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	PRKAA1	Q13131	559 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	ACAP2	Q15057	778 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	OR4D1	Q15615	310 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	PHKG1	Q16816	387 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	RSPO4	Q2I0M5	234 aa	Predicted RBP	9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	NKAIN2	Q5VXU1	208 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	C16orf46	Q6P387	395 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	KLHL35	Q6PF15	583 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	USP53	Q70EK8	1073 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	PIP4P1	Q86T03	277 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	ISCA2	Q86U28	154 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	TRABD2A	Q86V40	505 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	AMIGO1	Q86WK6	493 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	SYTL1	Q8IYJ3	562 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	CENPL	Q8N0S6	344 aa	Predicted RBP	9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	PLD6	Q8N2A8	252 aa	Known RBP	9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	C2orf73	Q8N5S3	287 aa	Predicted RBP	9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	CCDC63	Q8NA47	563 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	DLG3	Q92796	817 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	KIAA1191	Q96A73	305 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	ALKBH8	Q96BT7	664 aa	Known RBP	9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	PTER	Q96BW5	349 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	PGM2	Q96G03	612 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	CCDC138	Q96M89	665 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	IL17F	Q96PD4	163 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	CCDC3	Q9BQI4	270 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	UCK1	Q9HA47	277 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	TMBIM4	Q9HC24	238 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	KCNK9	Q9NPC2	374 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	ABCF3	Q9NUQ8	709 aa		9.87	□□□□□ -0.83
CPSF7-221	ENST00000543545	ZNF358	Q9NW07	568 aa		9.87	□□□□□ -0.83

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms