RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 MKS1Q9NXB0 559 aa22.5■■□□□ 1.19
HOMER3-205ENST00000542541 ADAMTS6Q9UKP5 1117 aa22.5■■□□□ 1.19
HOMER3-205ENST00000542541 ZNF292O60281 2723 aa22.5■■□□□ 1.19
HOMER3-205ENST00000542541 ZFC3H1O60293 1989 aaKnown RBP22.5■■□□□ 1.19
HOMER3-205ENST00000542541 NPEPPSL1A6NEC2 478 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 GLRBP48167 497 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 MAZP56270 477 aaKnown RBP22.49■■□□□ 1.19
HOMER3-205ENST00000542541 NR0B2Q15466 257 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 DUS1LQ6P1R4 473 aaKnown RBP22.49■■□□□ 1.19
HOMER3-205ENST00000542541 FRA10AC1Q70Z53 315 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 SFTPA2Q8IWL1 248 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 BANPQ8N9N5 519 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 APOPT1Q96IL0 206 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 SCYL1Q96KG9 808 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 ATP6V1G3Q96LB4 118 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.49■■□□□ 1.19
HOMER3-205ENST00000542541 ALG9Q9H6U8 611 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 SSU72Q9NP77 194 aaKnown RBP22.49■■□□□ 1.19
HOMER3-205ENST00000542541 PADI4Q9UM07 663 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 EP300Q09472 2414 aaPredicted RBP22.49■■□□□ 1.19
HOMER3-205ENST00000542541 ARHGEF33A8MVX0 844 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 NUDT21O43809 227 aaKnown RBP22.49■■□□□ 1.19
HOMER3-205ENST00000542541 CD59P13987 128 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 DUSP3P51452 185 aaPredicted RBP22.49■■□□□ 1.19
HOMER3-205ENST00000542541 AP1S2P56377 157 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 SBSNQ6UWP8 590 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 GPSM1Q86YR5 675 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 RAB42Q8N4Z0 105 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 PTERQ96BW5 349 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 TLCD1Q96CP7 247 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 CAMK1GQ96NX5 476 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 MRPL57Q9BQC6 102 aaKnown RBP22.49■■□□□ 1.19
HOMER3-205ENST00000542541 HGH1Q9BTY7 390 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 KIR3DX1Q9H7L2 352 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 RDH14Q9HBH5 336 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 RNF112Q9ULX5 631 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 PDE10AQ9Y233 779 aa22.49■■□□□ 1.19
HOMER3-205ENST00000542541 TDRKHQ9Y2W6 561 aaKnown RBP22.49■■□□□ 1.19
HOMER3-205ENST00000542541 RHPN2P1A8MT19 583 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 SYCE1LA8MT33 242 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 GLB1P16278 677 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 GPS2Q13227 327 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 PRKG2Q13237 762 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.48■■□□□ 1.19
HOMER3-205ENST00000542541 STPG1Q5TH74 334 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 DLG3Q92796 817 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 ARL8AQ96BM9 186 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 UCK1Q9HA47 277 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 ZNF358Q9NW07 568 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 IKZF3Q9UKT9 509 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 BTBD3Q9Y2F9 522 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 OARD1Q9Y530 152 aa22.48■■□□□ 1.19
HOMER3-205ENST00000542541 ARHGEF17Q96PE2 2063 aaPredicted RBP22.48■■□□□ 1.19
HOMER3-205ENST00000542541 DNAH14Q0VDD8 3507 aa22.47■■□□□ 1.19
HOMER3-205ENST00000542541 HMGB1P1B2RPK0 211 aaPredicted RBP22.47■■□□□ 1.19
HOMER3-205ENST00000542541 GDF9O60383 454 aa22.47■■□□□ 1.19
HOMER3-205ENST00000542541 GFRA3O60609 400 aa22.47■■□□□ 1.19
HOMER3-205ENST00000542541 KERAO60938 352 aa22.47■■□□□ 1.19
HOMER3-205ENST00000542541 SYF2O95926 243 aaKnown RBP22.47■■□□□ 1.19
HOMER3-205ENST00000542541 TOP3BO95985 862 aaKnown RBP22.47■■□□□ 1.19
HOMER3-205ENST00000542541 BDKRB1P46663 353 aa22.47■■□□□ 1.19
HOMER3-205ENST00000542541 MAGOHP61326 146 aaKnown RBP22.47■■□□□ 1.19
HOMER3-205ENST00000542541 OR4D1Q15615 310 aa22.47■■□□□ 1.19
HOMER3-205ENST00000542541 HSP90B2PQ58FF3 399 aa22.47■■□□□ 1.19
HOMER3-205ENST00000542541 OR9A1PQ8NGU1 263 aa22.47■■□□□ 1.19
HOMER3-205ENST00000542541 CCDC138Q96M89 665 aa22.47■■□□□ 1.19
HOMER3-205ENST00000542541 MRPL46Q9H2W6 279 aaKnown RBP22.47■■□□□ 1.19
HOMER3-205ENST00000542541 TMEM216Q9P0N5 145 aa22.47■■□□□ 1.19
HOMER3-205ENST00000542541 LRIT1Q9P2V4 623 aa22.47■■□□□ 1.19
HOMER3-205ENST00000542541 LNPEPQ9UIQ6 1025 aa22.47■■□□□ 1.19
HOMER3-205ENST00000542541 PPM1DO15297 605 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 ZW10O43264 779 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 LDOC1O95751 146 aaPredicted RBP22.46■■□□□ 1.19
HOMER3-205ENST00000542541 HSD17B2P37059 387 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 LIMK1P53667 647 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 DAB2P98082 770 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 PHKG1Q16816 387 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 PPP1R3AQ16821 1122 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 PROX2Q3B8N5 592 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 CCDC153Q494R4 210 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.46■■□□□ 1.19
HOMER3-205ENST00000542541 N4BP2L1Q5TBK1 243 aaPredicted RBP22.46■■□□□ 1.19
HOMER3-205ENST00000542541 TMEM26Q6ZUK4 368 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 NAXDQ8IW45 347 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 NAT6Q93015 286 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 SLC38A3Q99624 504 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 RAB11FIP5Q9BXF6 653 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 ARL15Q9NXU5 204 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 UTP6Q9NYH9 597 aaKnown RBP22.46■■□□□ 1.19
HOMER3-205ENST00000542541 RIF1Q5UIP0 2472 aaKnown RBP22.46■■□□□ 1.19
HOMER3-205ENST00000542541 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.46■■□□□ 1.19
HOMER3-205ENST00000542541 MYO1CO00159 1063 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 SPAG7O75391 227 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 CKMT1AP12532 417 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 CDKL1Q00532 357 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 GPR18Q14330 331 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 PLCL1Q15111 1095 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 TGFBIQ15582 683 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 TECRLQ5HYJ1 363 aa22.46■■□□□ 1.19
HOMER3-205ENST00000542541 CDKL4Q5MAI5 379 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms