RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 SLC22A3O75751 556 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 NCF1P14598 390 aaPredicted RBP16.81■□□□□ 0.28
SPIDR-227ENST00000541342 POLR2JP52435 117 aaKnown RBP16.81■□□□□ 0.28
SPIDR-227ENST00000541342 MAPK10P53779 464 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 EEFSECP57772 596 aaKnown RBP16.81■□□□□ 0.28
SPIDR-227ENST00000541342 SELPLGQ14242 412 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 ZNF829Q3KNS6 432 aaPredicted RBP16.81■□□□□ 0.28
SPIDR-227ENST00000541342 XAF1Q6GPH4 301 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 Q6ZVU0 165 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 ZBTB46Q86UZ6 589 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 DCBLD1Q8N8Z6 715 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 SIDT2Q8NBJ9 832 aaKnown RBP16.81■□□□□ 0.28
SPIDR-227ENST00000541342 CHST14Q8NCH0 376 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 STAG3L4Q8TBR4 150 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 ESAMQ96AP7 390 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 P2RY12Q9H244 342 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 CCDC154A6NI56 674 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 PRAMEF1O95521 474 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 UMPSP11172 480 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 ZNF182P17025 639 aaPredicted RBP16.81■□□□□ 0.28
SPIDR-227ENST00000541342 UGT1A1P22309 533 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 UGT1A4P22310 534 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 TTKP33981 857 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 UGT1A3P35503 534 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 UGT1A5P35504 534 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 GRSF1Q12849 480 aaKnown RBP eCLIP16.81■□□□□ 0.28
SPIDR-227ENST00000541342 PLA2G4EQ3MJ16 856 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 CCNYL2Q5T2Q4 361 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 SLC2A7Q6PXP3 512 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 KIAA0907Q7Z7F0 614 aaPredicted RBP16.81■□□□□ 0.28
SPIDR-227ENST00000541342 PAF1Q8N7H5 531 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 SORCS1Q8WY21 1168 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 ZDHHC6Q9H6R6 413 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 IL26Q9NPH9 171 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 VPS9D1Q9Y2B5 631 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 NPEPPSL1A6NEC2 478 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 IQCF5A8MTL0 148 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 BPIP17213 487 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 HTR1EP28566 365 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 PBX2P40425 430 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 EMX2Q04743 252 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 GRIK2Q13002 908 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 AAK1Q2M2I8 961 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 CARD16Q5EG05 197 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 OTUD3Q5T2D3 398 aaPredicted RBP16.81■□□□□ 0.28
SPIDR-227ENST00000541342 C1QTNF3Q9BXJ4 246 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 MARK1Q9P0L2 795 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 SLC30A1Q9Y6M5 507 aa16.81■□□□□ 0.28
SPIDR-227ENST00000541342 ZNF197O14709 1029 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 ESRRBO95718 433 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 TSPAN12O95859 305 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 PTGER3P43115 390 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 PSMD7P51665 324 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 HK3P52790 923 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 ERVK-21P61565 698 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 NFATC3Q12968 1075 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 ZIK1Q3SY52 487 aaPredicted RBP16.8■□□□□ 0.28
SPIDR-227ENST00000541342 ANKS6Q68DC2 871 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 TMC5Q6UXY8 1006 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 DLEU7Q6UYE1 221 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 RALGPS2Q86X27 583 aaPredicted RBP16.8■□□□□ 0.28
SPIDR-227ENST00000541342 ZC3H7AQ8IWR0 971 aaKnown RBP16.8■□□□□ 0.28
SPIDR-227ENST00000541342 DTWD1Q8N5C7 304 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 CD200R1Q8TD46 325 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 RNF145Q96MT1 663 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 CEP44Q9C0F1 390 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 SUV39H2Q9H5I1 410 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 SYTL2Q9HCH5 934 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 LTB4R2Q9NPC1 389 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 KLK8O60259 260 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 POU2F2P09086 479 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 SHHQ15465 462 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 TGFBIQ15582 683 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 CRTC1Q6UUV9 634 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 CYB5D2Q8WUJ1 264 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 SMG7Q92540 1137 aaKnown RBP16.8■□□□□ 0.28
SPIDR-227ENST00000541342 LYSMD1Q96S90 227 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 CPEB1Q9BZB8 566 aaKnown RBP16.8■□□□□ 0.28
SPIDR-227ENST00000541342 LEF1Q9UJU2 399 aaPredicted RBP16.8■□□□□ 0.28
SPIDR-227ENST00000541342 CORINQ9Y5Q5 1042 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 PLXNB3Q9ULL4 1909 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 PRSS23O95084 383 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 ENO2P09104 434 aaPredicted RBP16.8■□□□□ 0.28
SPIDR-227ENST00000541342 BMXP51813 675 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 MLLT10P55197 1068 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 CRY1Q16526 586 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 PDCD4Q53EL6 469 aaKnown RBP16.8■□□□□ 0.28
SPIDR-227ENST00000541342 TCEAL5Q5H9L2 206 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 PDE12Q6L8Q7 609 aaKnown RBP16.8■□□□□ 0.28
SPIDR-227ENST00000541342 ZNF773Q6PK81 442 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 VN1R2Q8NFZ6 395 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 BORCS5Q969J3 196 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 PLEKHA8Q96JA3 519 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 BOCQ9BWV1 1114 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 ACTL8Q9H568 366 aa16.8■□□□□ 0.28
SPIDR-227ENST00000541342 CARS2Q9HA77 564 aaKnown RBP16.8■□□□□ 0.28
SPIDR-227ENST00000541342 H0YAE9 185 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 ALPLP05186 524 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 UGT2B4P06133 528 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 WEE1P30291 646 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms