RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 TAMM41Q96BW9 452 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 LRRC58Q96CX6 371 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 B3GALT6Q96L58 329 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 DACH2Q96NX9 599 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 YIPF2Q9BWQ6 316 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 TNKS2Q9H2K2 1166 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 POPDC3Q9HBV1 291 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 ARNT2Q9HBZ2 717 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 ANLNQ9NQW6 1124 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CHRAC1Q9NRG0 131 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 THG1LQ9NWX6 298 aaKnown RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CMTM6Q9NX76 183 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 GDAP2Q9NXN4 497 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 GTSE1Q9NYZ3 720 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CCDC167Q9P0B6 97 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 ENPP5Q9UJA9 477 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 RAB23Q9ULC3 237 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 ATXN7L1Q9ULK2 861 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 OAZ3Q9UMX2 235 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 MRPS23Q9Y3D9 190 aaKnown RBP7.53□□□□□ -1.2
CCDC60-204ENST00000539847 HSPE1-MOB4S4R3N1 261 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 CEP295Q9C0D2 2601 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 ATRXP46100 2492 aa7.53□□□□□ -1.2
CCDC60-204ENST00000539847 MN1Q10571 1320 aaPredicted RBP7.52□□□□□ -1.2
CCDC60-204ENST00000539847 MIA3Q5JRA6 1907 aa7.52□□□□□ -1.2
CCDC60-204ENST00000539847 A0A0J9YYE9 177 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 A8MT66 165 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 FXYD1O00168 92 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 TAF4O00268 1085 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 ARNTLO00327 626 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 PTGESO14684 152 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 LSM1O15116 133 aaKnown RBP7.52□□□□□ -1.21
CCDC60-204ENST00000539847 ARPC2O15144 300 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 CCL16O15467 120 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 B4GALT5O43286 388 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 BCAS1O75363 584 aaPredicted RBP7.52□□□□□ -1.21
CCDC60-204ENST00000539847 EEDO75530 441 aaKnown RBP7.52□□□□□ -1.21
CCDC60-204ENST00000539847 JRKO75564 520 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 ABLIM3O94929 683 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 RHOP08100 348 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 ENO2P09104 434 aaPredicted RBP7.52□□□□□ -1.21
CCDC60-204ENST00000539847 TFPTP0C1Z6 253 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 ERCC2P18074 760 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 POLR2EP19388 210 aaKnown RBP7.52□□□□□ -1.21
CCDC60-204ENST00000539847 CD247P20963 164 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 IL12AP29459 219 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 EEF1DP29692 281 aaKnown RBP7.52□□□□□ -1.21
CCDC60-204ENST00000539847 OR1D2P34982 312 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 PNPLA4P41247 253 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 RXRGP48443 463 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 SULT1E1P49888 294 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 NEK2P51955 445 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 TAS2R39P59534 338 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 EMX2Q04743 252 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 RALGDSQ12967 914 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 MTAPQ13126 283 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 SELPLGQ14242 412 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 TCEA2Q15560 299 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 CYP2A13Q16696 494 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 ARL13BQ3SXY8 428 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 C6orf141Q5SZD1 244 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 BSPRYQ5W0U4 402 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 BTBD8Q5XKL5 378 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 TPGS2Q68CL5 300 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 THOC7Q6I9Y2 204 aaKnown RBP7.52□□□□□ -1.21
CCDC60-204ENST00000539847 CRTC3Q6UUV7 619 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 BEND5Q7L4P6 421 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 ACOT1Q86TX2 421 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 SPPL2CQ8IUH8 684 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 SLC41A1Q8IVJ1 513 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 TCEAL8Q8IYN2 117 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 C8orf59Q8N0T1 100 aaPredicted RBP7.52□□□□□ -1.21
CCDC60-204ENST00000539847 LGI2Q8N0V4 545 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 DEFB106AQ8N104 65 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 TMCO5AQ8N6Q1 288 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 C12orf29Q8N999 325 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 ACVR1CQ8NER5 493 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 PPHLN1Q8NEY8 458 aaKnown RBP7.52□□□□□ -1.21
CCDC60-204ENST00000539847 ZNF461Q8TAF7 563 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 RHEBL1Q8TAI7 183 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 ITFG1Q8TB96 612 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 AGR3Q8TD06 166 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 FBLIM1Q8WUP2 373 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 PEX13Q92968 403 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 IRF7Q92985 503 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 TBC1D20Q96BZ9 403 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 C19orf60Q96EN9 201 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 TXNDC15Q96J42 360 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 TNIP3Q96KP6 325 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 NUSAP1Q9BXS6 441 aaKnown RBP7.52□□□□□ -1.21
CCDC60-204ENST00000539847 DUSP16Q9BY84 665 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 MUC3BQ9H195 1237 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 GSTO2Q9H4Y5 243 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 FANCEQ9HB96 536 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 TRPV4Q9HBA0 871 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 TREX1Q9NSU2 369 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 PAK1IP1Q9NWT1 392 aaPredicted RBP7.52□□□□□ -1.21
CCDC60-204ENST00000539847 ZIM2Q9NZV7 527 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 SEPT10Q9P0V9 454 aa7.52□□□□□ -1.21
CCDC60-204ENST00000539847 GMPR2Q9P2T1 348 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms