RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 KIAA0930Q6ICG6 404 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-209ENST00000539197 NCEH1Q6PIU2 408 aa4.08□□□□□ -1.76
CCDC7-209ENST00000539197 SCYL3Q8IZE3 742 aa4.08□□□□□ -1.76
CCDC7-209ENST00000539197 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-209ENST00000539197 MYRIPQ8NFW9 859 aa4.08□□□□□ -1.76
CCDC7-209ENST00000539197 VANGL1Q8TAA9 524 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-209ENST00000539197 ERLEC1Q96DZ1 483 aa4.08□□□□□ -1.76
CCDC7-209ENST00000539197 TEX10Q9NXF1 929 aaPredicted RBP4.08□□□□□ -1.76
CCDC7-209ENST00000539197 AMACRQ9UHK6 382 aa4.08□□□□□ -1.76
CCDC7-209ENST00000539197 PRO0461Q9UI25 63 aa4.08□□□□□ -1.76
CCDC7-209ENST00000539197 NENFQ9UMX5 172 aa4.08□□□□□ -1.76
CCDC7-209ENST00000539197 PPP2R2CQ9Y2T4 447 aa4.08□□□□□ -1.76
CCDC7-209ENST00000539197 HPRP00739 348 aa4.07□□□□□ -1.76
CCDC7-209ENST00000539197 SRPRAP08240 638 aaKnown RBP4.07□□□□□ -1.76
CCDC7-209ENST00000539197 IKQ13123 557 aaPredicted RBP4.07□□□□□ -1.76
CCDC7-209ENST00000539197 RNF212Q495C1 297 aa4.07□□□□□ -1.76
CCDC7-209ENST00000539197 PHLDA2Q53GA4 152 aa4.07□□□□□ -1.76
CCDC7-209ENST00000539197 C20orf194Q5TEA3 1177 aa4.07□□□□□ -1.76
CCDC7-209ENST00000539197 CPLX4Q7Z7G2 160 aa4.07□□□□□ -1.76
CCDC7-209ENST00000539197 CPXCR1Q8N123 301 aa4.07□□□□□ -1.76
CCDC7-209ENST00000539197 AQP11Q8NBQ7 271 aa4.07□□□□□ -1.76
CCDC7-209ENST00000539197 JMJD4Q9H9V9 463 aa4.07□□□□□ -1.76
CCDC7-209ENST00000539197 CMAHPQ9Y471 501 aa4.07□□□□□ -1.76
CCDC7-209ENST00000539197 A0A1W2PR77 199 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 LIPT2A6NK58 231 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 HS6ST1O60243 411 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 CDH2P19022 906 aaPredicted RBP4.06□□□□□ -1.76
CCDC7-209ENST00000539197 CAMPP49913 170 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 PDX1P52945 283 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 MELKQ14680 651 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 ZRSR2Q15696 482 aaKnown RBP4.06□□□□□ -1.76
CCDC7-209ENST00000539197 C15orf32Q32M92 178 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 LYSMD4Q5XG99 296 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 SEL1L3Q68CR1 1132 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 JADE1Q6IE81 842 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 TMEM139Q8IV31 216 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 NUP37Q8NFH4 326 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 SRSF8Q9BRL6 282 aaKnown RBP4.06□□□□□ -1.76
CCDC7-209ENST00000539197 TAS2R14Q9NYV8 317 aa4.06□□□□□ -1.76
CCDC7-209ENST00000539197 ASB14A6NK59 587 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 RSL1D1O76021 490 aaKnown RBP4.05□□□□□ -1.76
CCDC7-209ENST00000539197 TPPPO94811 219 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 HSPA1AP0DMV8 641 aaKnown RBP4.05□□□□□ -1.76
CCDC7-209ENST00000539197 HSPA1BP0DMV9 641 aaKnown RBP4.05□□□□□ -1.76
CCDC7-209ENST00000539197 PIK3R1P27986 724 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 MTHFSDQ2M296 383 aaKnown RBP4.05□□□□□ -1.76
CCDC7-209ENST00000539197 SARM1Q6SZW1 724 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 MARCH9Q86YJ5 346 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 KRTAP11-1Q8IUC1 163 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 TRIML1Q8N9V2 468 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 POMGNT1Q8WZA1 660 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 PSMD1Q99460 953 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 NUP85Q9BW27 656 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 SHARPINQ9H0F6 387 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 GNB4Q9HAV0 340 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 FGF21Q9NSA1 209 aa4.05□□□□□ -1.76
CCDC7-209ENST00000539197 ZNF701Q9NV72 531 aaPredicted RBP4.05□□□□□ -1.76
CCDC7-209ENST00000539197 ZHX1Q9UKY1 873 aaPredicted RBP4.05□□□□□ -1.76
CCDC7-209ENST00000539197 A0A1W2PR80 420 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 IGHV4-31P0DP07 118 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 SLC6A6P31641 620 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 SLC47A2Q86VL8 602 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.04□□□□□ -1.76
CCDC7-209ENST00000539197 GPRC5AQ8NFJ5 357 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 OR6S1Q8NH40 331 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 MAPK15Q8TD08 544 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 SLC45A3Q96JT2 553 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 NECTIN4Q96NY8 510 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 RTN4RQ9BZR6 473 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 CPVLQ9H3G5 476 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 MED20Q9H944 212 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 ABCB10Q9NRK6 738 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 OR6C2Q9NZP2 312 aa4.04□□□□□ -1.76
CCDC7-209ENST00000539197 CORO1CQ9ULV4 474 aaPredicted RBP4.04□□□□□ -1.76
CCDC7-209ENST00000539197 HYKKA2RU49 373 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 ANKRD61A6NGH8 418 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 ACOD1A6NK06 481 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 PI4K2BG5E9Z4 385 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 RTN3O95197 1032 aaPredicted RBP4.03□□□□□ -1.76
CCDC7-209ENST00000539197 DHX8Q14562 1220 aaKnown RBP4.03□□□□□ -1.76
CCDC7-209ENST00000539197 ITPRIPL2Q3MIP1 535 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 FAM98BQ52LJ0 330 aaKnown RBP4.03□□□□□ -1.76
CCDC7-209ENST00000539197 SLC25A47Q6Q0C1 308 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 TMEM207Q6UWW9 146 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 SLC34A3Q8N130 599 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 EID3Q8N140 333 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 PDILTQ8N807 584 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 OR5M8Q8NGP6 311 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 C11orf45Q8TAV5 145 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 LRRC15Q8TF66 581 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 PHLDA1Q8WV24 401 aaPredicted RBP4.03□□□□□ -1.76
CCDC7-209ENST00000539197 IRGQQ8WZA9 623 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 CYYR1Q96J86 154 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 AGAP4Q96P64 663 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 PPIL3Q9H2H8 161 aaKnown RBP4.03□□□□□ -1.76
CCDC7-209ENST00000539197 PPANQ9NQ55 473 aaKnown RBP4.03□□□□□ -1.76
CCDC7-209ENST00000539197 CACNG4Q9UBN1 327 aa4.03□□□□□ -1.76
CCDC7-209ENST00000539197 HEPACAM2A8MVW5 462 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 A8MZ25 164 aa4.02□□□□□ -1.77
CCDC7-209ENST00000539197 PHOX2AO14813 284 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms