RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 GADL1Q6ZQY3 521 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 SPRED1Q7Z699 444 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 ZBTB33Q86T24 672 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 ZC3HC1Q86WB0 502 aaKnown RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 C8orf59Q8N0T1 100 aaPredicted RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 TRIM43Q96BQ3 446 aaPredicted RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 ZNF707Q96C28 371 aaPredicted RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 TMCO6Q96DC7 493 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 YIPF6Q96EC8 236 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 SLC47A1Q96FL8 570 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 MBOAT4Q96T53 435 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 TTPALQ9BTX7 342 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 PPA2Q9H2U2 334 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 PCDHB16Q9NRJ7 776 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 FBXO28Q9NVF7 368 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 TAS2R16Q9NYV7 291 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 CCDC59Q9P031 241 aaKnown RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 EMC3Q9P0I2 261 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 WRAP73Q9P2S5 460 aaPredicted RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 SLC6A14Q9UN76 642 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 CDYLQ9Y232 598 aa3.65□□□□□ -1.82
MCF2-210ENST00000536274 MRPL42Q9Y6G3 142 aaKnown RBP3.65□□□□□ -1.82
MCF2-210ENST00000536274 SYNJ2BP-COX16A0A087WUM0 186 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 A0A096LPI6 279 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 CCL15-CCL14A0A0B4J2E2 113 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 DDX39AO00148 427 aaKnown RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 GTPBP1O00178 669 aaKnown RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 AREL1O15033 823 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 YKT6O15498 198 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 HS6ST1O60243 411 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 SRP72O76094 671 aaKnown RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 TOXO94900 526 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 EGFP01133 1207 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 UQCRFS1P1P0C7P4 283 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 POU3F2P20265 443 aaPredicted RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 MYL9P24844 172 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 PSMA4P25789 261 aaKnown RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 C21orf33P30042 268 aaPredicted RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 TGFBR2P37173 567 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 GRIK1P39086 918 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 CAPZA1P52907 286 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 SMAD3P84022 425 aaKnown RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 MPP1Q00013 466 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 YWHAHQ04917 246 aaPredicted RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 SPP2Q13103 211 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 PICALMQ13492 652 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 ALKBH1Q13686 389 aaKnown RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 SERTAD2Q14140 314 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 SQLEQ14534 574 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 SMAD2Q15796 467 aaKnown RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 CCL15Q16663 113 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 UAP1L1Q3KQV9 507 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 Q3ZCU0 254 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 FBXO48Q5FWF7 155 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 ZBTB37Q5TC79 503 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 SLFN12LQ6IEE8 588 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 PNCKQ6P2M8 343 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 AHSA2Q719I0 299 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 TMEM179BQ7Z7N9 219 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 ZDHHC17Q8IUH5 632 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 FAM178BQ8IXR5 827 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 ARFGAP1Q8N6T3 406 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 BOLLQ8N9W6 283 aaKnown RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 PIK3C3Q8NEB9 887 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 TTC16Q8NEE8 873 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 OR11H4Q8NGC9 324 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 GPR151Q8TDV0 419 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 GPRASP2Q96D09 838 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 SGTBQ96EQ0 304 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 CXorf58Q96LI9 332 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 BARD1Q99728 777 aaKnown RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 MAP3K3Q99759 626 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 PTPN18Q99952 460 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 C11orf54Q9H0W9 315 aaPredicted RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 ZNF385DQ9H6B1 395 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 CARS2Q9HA77 564 aaKnown RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 ABCB9Q9NP78 766 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 GSN-AS1Q9NRJ2 163 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 SDHAF3Q9NRP4 125 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 CMTM6Q9NX76 183 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 COA4Q9NYJ1 87 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 ASH2LQ9UBL3 628 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 AFF4Q9UHB7 1163 aaKnown RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 GTF2IRD1Q9UHL9 959 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 ALG5Q9Y673 324 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 CDY2AQ9Y6F7 541 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 CDY1Q9Y6F8 540 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 ATP8B3O60423 1300 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 LRRC37A2A6NM11 1700 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 PDE4DIPQ5VU43 2346 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 GREB1LQ9C091 1923 aaPredicted RBP3.65□□□□□ -1.83
MCF2-210ENST00000536274 A0A1B0GVM2 712 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 SLC22A23A1A5C7 686 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 H3BM21 787 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 M0R129 80 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 BET1O15155 118 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 FABP7O15540 132 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 AIREO43918 545 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 PLOD3O60568 738 aa3.65□□□□□ -1.83
MCF2-210ENST00000536274 CDK1P06493 297 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms