RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 UNC5DQ6UXZ4 953 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 CYS1Q717R9 158 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 PIWIL4Q7Z3Z4 852 aaKnown RBP17.35■□□□□ 0.37
DDX55-204ENST00000536079 SLC26A11Q86WA9 606 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 AMIGO1Q86WK6 493 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 RASGRP3Q8IV61 690 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 GSPT2Q8IYD1 628 aaKnown RBP17.35■□□□□ 0.37
DDX55-204ENST00000536079 C2orf73Q8N5S3 287 aaPredicted RBP17.35■□□□□ 0.37
DDX55-204ENST00000536079 SKA2Q8WVK7 121 aaPredicted RBP17.35■□□□□ 0.37
DDX55-204ENST00000536079 NXPE2Q96DL1 559 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 MAP3K3Q99759 626 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 TWSG1Q9GZX9 223 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 RAB33BQ9H082 229 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 KLHL42Q9P2K6 505 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 PISDQ9UG56 409 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 PCDHGA8Q9Y5G5 932 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 COMMD10Q9Y6G5 202 aa17.35■□□□□ 0.37
DDX55-204ENST00000536079 ARHGEF33A8MVX0 844 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 TLX3O43711 291 aaPredicted RBP17.34■□□□□ 0.37
DDX55-204ENST00000536079 VPS26AO75436 327 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 TNFSF15O95150 251 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 GSTA2P09210 222 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 FAM153BP0C7A2 387 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 DEKP35659 375 aaKnown RBP17.34■□□□□ 0.37
DDX55-204ENST00000536079 SEPHS1P49903 392 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 TRA2AQ13595 282 aaKnown RBP eCLIP17.34■□□□□ 0.37
DDX55-204ENST00000536079 ZNF460Q14592 562 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 FAM153CQ494X1 144 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 OOSP2Q86WS3 158 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 RELL1Q8IUW5 271 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 DCUN1D3Q8IWE4 304 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 BMPERQ8N8U9 685 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 LINC01555Q8NAE3 123 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 FLVCR1-AS1Q8TAF5 88 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 DMXL2Q8TDJ6 3036 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 DENND1AQ8TEH3 1009 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 EEF1AKMT1Q8WVE0 214 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 DLG3Q92796 817 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 SLC46A1Q96NT5 459 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 FMO2Q99518 471 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 CCDC86Q9H6F5 360 aaKnown RBP17.34■□□□□ 0.37
DDX55-204ENST00000536079 POLG2Q9UHN1 485 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 MTO1Q9Y2Z2 717 aaKnown RBP17.34■□□□□ 0.37
DDX55-204ENST00000536079 VWA7Q9Y334 891 aa17.34■□□□□ 0.37
DDX55-204ENST00000536079 EFCAB7A8K855 629 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 HGSO14964 777 aaPredicted RBP17.33■□□□□ 0.36
DDX55-204ENST00000536079 PRAMEF10O60809 474 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 PSIP1O75475 530 aaKnown RBP17.33■□□□□ 0.36
DDX55-204ENST00000536079 TSPAN12O95859 305 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 MYBL2P10244 700 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 PKLRP30613 574 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 SH3BP2P78314 561 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 TEX35Q5T0J7 233 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 CACHD1Q5VU97 1274 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 PRSS42Q7Z5A4 293 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 CEP97Q8IW35 865 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 FAM20CQ8IXL6 584 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 GABPB2Q8TAK5 448 aaPredicted RBP17.33■□□□□ 0.36
DDX55-204ENST00000536079 RNF31Q96EP0 1072 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 ELMO2Q96JJ3 720 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 CMKLR1Q99788 373 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 FAM129AQ9BZQ8 928 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 CDC42EP4Q9H3Q1 356 aaKnown RBP17.33■□□□□ 0.36
DDX55-204ENST00000536079 CAB39LQ9H9S4 337 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 SIDT1Q9NXL6 827 aaKnown RBP17.33■□□□□ 0.36
DDX55-204ENST00000536079 TAS2R13Q9NYV9 303 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 ACTR10Q9NZ32 417 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 SEMA5BQ9P283 1151 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 MTRF1LQ9UGC7 380 aaKnown RBP17.33■□□□□ 0.36
DDX55-204ENST00000536079 TRMT6Q9UJA5 497 aaKnown RBP17.33■□□□□ 0.36
DDX55-204ENST00000536079 ADAMTS6Q9UKP5 1117 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 IKZF3Q9UKT9 509 aa17.33■□□□□ 0.36
DDX55-204ENST00000536079 FAM95CA0A1B0GW59 222 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 CDRT15L2A8MXV6 281 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 C9orf172C9J069 976 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 RASSF9O75901 435 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 DXOO77932 396 aaKnown RBP17.32■□□□□ 0.36
DDX55-204ENST00000536079 CHRM5P08912 532 aaPredicted RBP17.32■□□□□ 0.36
DDX55-204ENST00000536079 ANKRD34CP0C6C1 535 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 MPC1LP0DKB6 136 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 PVRP15151 417 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 SAT1P21673 171 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 CD9P21926 228 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 PRDX3P30048 256 aaKnown RBP17.32■□□□□ 0.36
DDX55-204ENST00000536079 GMPRP36959 345 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 MAPK10P53779 464 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 TAS2R39P59534 338 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 EIF3IQ13347 325 aaKnown RBP17.32■□□□□ 0.36
DDX55-204ENST00000536079 KCNAB1Q14722 419 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 TTLL9Q3SXZ7 439 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 FAM45BPQ6NSW5 357 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 KLHL35Q6PF15 583 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 NEK10Q6ZWH5 1172 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 TRIM73Q86UV7 250 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 TAX1BP1Q86VP1 789 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 CTAGE3PQ8IX95 158 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 IFT20Q8IY31 132 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 PPM1NQ8N819 430 aa17.32■□□□□ 0.36
DDX55-204ENST00000536079 KDF1Q8NAX2 398 aaPredicted RBP17.32■□□□□ 0.36
DDX55-204ENST00000536079 AGBL5Q8NDL9 886 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms