RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SHMT2P34897 504 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 TSPAN7P41732 249 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 MAGEA4P43358 317 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 KPNA2P52292 529 aaKnown RBP22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 GRB7Q14451 532 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 KYNUQ16719 465 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 ST3GAL2Q16842 350 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 TTLL9Q3SXZ7 439 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 DNTTIP2Q5QJE6 756 aaKnown RBP22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 ARMC6Q6NXE6 501 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 ADGRF3Q8IZF5 1079 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 SNIP1Q8TAD8 396 aaKnown RBP22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 KLHL6Q8WZ60 621 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 INPP5DQ92835 1189 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 FGF11Q92914 225 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 MAP3K3Q99759 626 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 MENTQ9BUN1 341 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 TWSG1Q9GZX9 223 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 SMYD2Q9NRG4 433 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 ZFATQ9P243 1243 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 TSR3Q9UJK0 312 aaKnown RBP22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 POMT2Q9UKY4 750 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 RAXQ9Y2V3 346 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 PCDHGA7Q9Y5G6 932 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 DMXL2Q8TDJ6 3036 aa22.05■■□□□ 1.12
SFSWAP-204ENST00000535399 IGHV5-51A0A0C4DH38 117 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 VPS26AO75436 327 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 C1orf105O95561 183 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 GSTA2P09210 222 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 MAPK10P53779 464 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 CDKN2DP55273 166 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 PRKAA1Q13131 559 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 CUL1Q13616 776 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 KLHL38Q2WGJ6 581 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 C3orf62Q6ZUJ4 267 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 CYS1Q717R9 158 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 FAM129CQ86XR2 697 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 SKA2Q8WVK7 121 aaPredicted RBP22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 USP7Q93009 1102 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 PPM1MQ96MI6 270 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 FAM129AQ9BZQ8 928 aa22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 SIDT1Q9NXL6 827 aaKnown RBP22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 CORO1CQ9ULV4 474 aaPredicted RBP22.04■■□□□ 1.12
SFSWAP-204ENST00000535399 USP24Q9UPU5 2620 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 TCRBV9S1A1TA0A576 114 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 TLCD2A6NGC4 264 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 CXorf49A8MYA2 514 aaPredicted RBP22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 C9orf172C9J069 976 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 MATN2O00339 956 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 NVLO15381 856 aaKnown RBP22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 PIAS1O75925 651 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 C1QAP02745 245 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 PKLRP30613 574 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 BDKRB1P46663 353 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 SEPHS1P49903 392 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 MC2RQ01718 297 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 CYHR1Q6ZMK1 362 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 NEK10Q6ZWH5 1172 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 STRA8Q7Z7C7 330 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 SLC26A11Q86WA9 606 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 LRRN4CLQ8ND94 238 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 UBXN4Q92575 508 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 PMEPA1Q969W9 287 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 SLC41A2Q96JW4 573 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 FOPNLQ96NB1 174 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 L2HGDHQ9H9P8 463 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 LRRC4CQ9HCJ2 640 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 TAS2R13Q9NYV9 303 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 ACTR10Q9NZ32 417 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 OR6C2Q9NZP2 312 aa22.03■■□□□ 1.12
SFSWAP-204ENST00000535399 GSAPA4D1B5 854 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 ENO3P13929 434 aaPredicted RBP22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 CD9P21926 228 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 ECHS1P30084 290 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 SLC5A2P31639 672 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 CCSMST1Q4G0I0 132 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 HECTD2Q5U5R9 776 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 UGT3A1Q6NUS8 523 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 ZC3HC1Q86WB0 502 aaKnown RBP22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 RASGRP3Q8IV61 690 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 CPNE9Q8IYJ1 553 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 GPATCH11Q8N954 259 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 TAAR9Q96RI9 348 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 MCMBPQ9BTE3 642 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 B3GNT4Q9C0J1 378 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 SLC39A1Q9NY26 324 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 FOXJ2Q9P0K8 574 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 CIDEBQ9UHD4 219 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 TRMT6Q9UJA5 497 aaKnown RBP22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 PCDHGA3Q9Y5H0 932 aa22.02■■□□□ 1.12
SFSWAP-204ENST00000535399 FAM159BA6NKW6 160 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 C2orf74A8MZ97 194 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 KDM1AO60341 852 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 PRAMEF10O60809 474 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 PSIP1O75475 530 aaKnown RBP22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 CHRM5P08912 532 aaPredicted RBP22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 MPC1LP0DKB6 136 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 CBSLP0DN79 551 aa22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 NELFEP18615 380 aaKnown RBP22.01■■□□□ 1.11
SFSWAP-204ENST00000535399 MCM3P25205 808 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms