RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 VSTM1Q6UX27 236 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 RBM15BQ8NDT2 890 aaKnown RBP12.43□□□□□ -0.42
SPG11-203ENST00000535302 STYXQ8WUJ0 223 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 ZNF350Q9GZX5 532 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 ETAA1Q9NY74 926 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 AGLP35573 1532 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 MEN1O00255 615 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 CFHP08603 1231 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 CES1P23141 567 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 E2F2Q14209 437 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 LARS2Q15031 903 aaKnown RBP12.43□□□□□ -0.42
SPG11-203ENST00000535302 ZYG11AQ6WRX3 759 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 SPATA19Q7Z5L4 167 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 AADATQ8N5Z0 425 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 OR13C4Q8NGS5 318 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 LPGAT1Q92604 370 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 C12orf66Q96MD2 445 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 CCDC177Q9NQR7 707 aaPredicted RBP12.43□□□□□ -0.42
SPG11-203ENST00000535302 GRHL1Q9NZI5 618 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 GMEB2Q9UKD1 530 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 COLEC10Q9Y6Z7 277 aa12.43□□□□□ -0.42
SPG11-203ENST00000535302 ARHGEF28Q8N1W1 1705 aaKnown RBP12.43□□□□□ -0.42
SPG11-203ENST00000535302 C5orf60A6NFR6 353 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 RIIAD1A6NNX1 92 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 ZNF823P16415 610 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 PTPN2P17706 415 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 USF2Q15853 346 aaPredicted RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 KIAA1161Q6NSJ0 714 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 MED27Q6P2C8 311 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 TNFAIP8L2Q6P589 184 aaPredicted RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 TRPV1Q8NER1 839 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 RAPGEFL1Q9UHV5 662 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 SORCS3Q9UPU3 1222 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 MRPS33Q9Y291 106 aaKnown RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 PPLO60437 1756 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 ANXA2P2A6NMY6 339 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 ANXA2P07355 339 aaKnown RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 CCNCP24863 283 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 CMPK1P30085 196 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 CDKN1CP49918 316 aaPredicted RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 ABCA11PQ4W5N1 156 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 RNF220Q5VTB9 566 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 METTL27Q8N6F8 245 aaPredicted RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 OR2AJ1Q8NGZ0 328 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 OR10A6Q8NH74 314 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 PIK3R3Q92569 461 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 MTERF1Q99551 399 aaKnown RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 HEPHQ9BQS7 1158 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 EHD1Q9H4M9 534 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 TVP23BQ9NYZ1 205 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 SNX7Q9UNH6 387 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 LDB2O43679 373 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 TSHRP16473 764 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 AIF1P55008 147 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 PRKCDQ05655 676 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 ARSIQ5FYB1 569 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 SFRP1Q8N474 314 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 OR5AK3PQ8NH89 298 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 HMGB4Q8WW32 186 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 OVCA2Q8WZ82 227 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 PYCR2Q96C36 320 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 TEFMQ96QE5 360 aaKnown RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 SMG9Q9H0W8 520 aaKnown RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 PNPLA3Q9NST1 481 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 VNN2O95498 520 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 DHFRP00374 187 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 APOC1P02654 83 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 UGT1A6P19224 532 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 CYP3A5P20815 502 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 UGT1A1P22309 533 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 UGT1A4P22310 534 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 TUBG1P23258 451 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 UGT1A3P35503 534 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 S100A10P60903 97 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 OLIG2Q13516 323 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 DCST1Q5T197 706 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 SYPL2Q5VXT5 272 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 BARD1Q99728 777 aaKnown RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 DPYSL5Q9BPU6 564 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 TAPBPLQ9BX59 468 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 LDAHQ9H6V9 325 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 FARSAQ9Y285 508 aaKnown RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 GRXCR2A6NFK2 248 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 RB1P06400 928 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 UNC5BQ8IZJ1 945 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 KCNC2Q96PR1 638 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 NIFKQ9BYG3 293 aaKnown RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 SDCBP2Q9H190 292 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 SRMSQ9H3Y6 488 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 PRDM8Q9NQV8 689 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 TBC1D14Q9P2M4 693 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 COPS7AQ9UBW8 275 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 MAGEL2Q9UJ55 1249 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 SAMD4AQ9UPU9 718 aaKnown RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 GOLGA4Q13439 2230 aaKnown RBP12.42□□□□□ -0.42
SPG11-203ENST00000535302 TNFRSF10BO14763 440 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 MATN3O15232 486 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 THRBP10828 461 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 TPSB2P20231 275 aa12.42□□□□□ -0.42
SPG11-203ENST00000535302 KELP23276 732 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms