RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 TAF1AQ15573 450 aaPredicted RBP3.98□□□□□ -1.77
SOX6-217ENST00000533870 OVOS1Q6IE37 1185 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 ATG14Q6ZNE5 492 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 LARP4Q71RC2 724 aaKnown RBP eCLIP3.98□□□□□ -1.77
SOX6-217ENST00000533870 NECAB2Q7Z6G3 386 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 ZNF467Q7Z7K2 595 aaPredicted RBP3.98□□□□□ -1.77
SOX6-217ENST00000533870 MICALL2Q8IY33 904 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 SLC22A17Q8WUG5 538 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 TMEM159Q96B96 161 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 SGTBQ96EQ0 304 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 PPP1R36Q96LQ0 422 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 C8orf37Q96NL8 207 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 NLNQ9BYT8 704 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 SPATC1LQ9H0A9 340 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 TOR3AQ9H497 397 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 AKTIPQ9H8T0 292 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 C12orf10Q9HB07 376 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 MAN1C1Q9NR34 630 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 CMTM6Q9NX76 183 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 MED11Q9P086 117 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 ZNF624Q9P2J8 865 aaPredicted RBP3.98□□□□□ -1.77
SOX6-217ENST00000533870 EMCNQ9ULC0 261 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 Q9Y3F1 56 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 LRP6O75581 1613 aa3.98□□□□□ -1.77
SOX6-217ENST00000533870 TSPOAP1O95153 1857 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 FAM149AA5PLN7 773 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 MAGEB17A8MXT2 336 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 JRKO75564 520 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 CYP7B1O75881 506 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 CLDN9O95484 217 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 LATS1O95835 1130 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 GLUD1P00367 558 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 EDNRBP24530 442 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 HOXC13P31276 330 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 ACSL1P33121 698 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 CSTF2P33240 577 aaKnown RBP eCLIP3.97□□□□□ -1.77
SOX6-217ENST00000533870 SLC9A3P48764 834 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 CLDN8P56748 225 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 SKP1P63208 163 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 ZNF252P-AS1Q0IIN9 211 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 ZNF284Q2VY69 593 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 SPDYE7PQ495Y7 208 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 SYTL3Q4VX76 610 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 ZRANB3Q5FWF4 1079 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 CPTPQ5TA50 214 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 UBE2UQ5VVX9 321 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 TMEM198Q66K66 360 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 ZNF57Q68EA5 555 aaPredicted RBP3.97□□□□□ -1.77
SOX6-217ENST00000533870 TAPT1Q6NXT6 567 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 SLC46A3Q7Z3Q1 461 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 LRRC56Q8IYG6 542 aaPredicted RBP3.97□□□□□ -1.77
SOX6-217ENST00000533870 SLC15A4Q8N697 577 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 TESCQ96BS2 214 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 SENP8Q96LD8 212 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 GPR20Q99678 358 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 IPPKQ9H8X2 491 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 ZNF358Q9NW07 568 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 POLR3BQ9NW08 1133 aaPredicted RBP3.97□□□□□ -1.77
SOX6-217ENST00000533870 MAT2BQ9NZL9 334 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 UPB1Q9UBR1 384 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 NAALAD2Q9Y3Q0 740 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 DNAJC15Q9Y5T4 150 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 PIGBOS1A0A0B4J2F0 54 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 NME4O00746 187 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 BANF1O75531 89 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 VNN2O95498 520 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 CHRNGP07510 517 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 EPCAMP16422 314 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 PTPRAP18433 802 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 AGTR1P30556 359 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 MNDAP41218 407 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 RBM34P42696 430 aaKnown RBP3.97□□□□□ -1.77
SOX6-217ENST00000533870 SLC1A2P43004 574 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 TAGLNQ01995 201 aaKnown RBP3.97□□□□□ -1.77
SOX6-217ENST00000533870 ASAH1Q13510 395 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 DSG2Q14126 1118 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 DUSP28Q4G0W2 176 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 FGD3Q5JSP0 725 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 ADNP2Q6IQ32 1131 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 FAM131AQ6UXB0 335 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 NPNTQ6UXI9 565 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 SLC30A10Q6XR72 485 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 AGMOQ6ZNB7 445 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 LILRA2Q8N149 483 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 HJURPQ8NCD3 748 aaPredicted RBP3.97□□□□□ -1.77
SOX6-217ENST00000533870 SLC7A6Q92536 515 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 PMM1Q92871 262 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 TMEM125Q96AQ2 219 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 HAVCR1Q96D42 359 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 FCRL2Q96LA5 508 aaPredicted RBP3.97□□□□□ -1.77
SOX6-217ENST00000533870 ACOX2Q99424 681 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 DPYSL5Q9BPU6 564 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 PELOQ9BRX2 385 aaKnown RBP3.97□□□□□ -1.77
SOX6-217ENST00000533870 MND1Q9BWT6 205 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 PITHD1Q9GZP4 211 aaPredicted RBP3.97□□□□□ -1.77
SOX6-217ENST00000533870 RC3H2Q9HBD1 1191 aaKnown RBP3.97□□□□□ -1.77
SOX6-217ENST00000533870 NEUROD4Q9HD90 331 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 NT5MQ9NPB1 228 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 TAS2R9Q9NYW1 312 aa3.97□□□□□ -1.77
SOX6-217ENST00000533870 FABP12A6NFH5 140 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms