RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ZDHHC12Q96GR4 267 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 OSBPL11Q9BXB4 747 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 TDRD1Q9BXT4 1180 aaKnown RBP11.09□□□□□ -0.63
PTPRK-221ENST00000532331 SESN1Q9Y6P5 492 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 CYP11A1P05108 521 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 JUNDP17535 347 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 TYRP1P17643 537 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 FASTKD3Q14CZ7 662 aaKnown RBP11.09□□□□□ -0.63
PTPRK-221ENST00000532331 HEPACAMQ14CZ8 416 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 NAIF1Q69YI7 327 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-221ENST00000532331 RINLQ6ZS11 566 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 TMC8Q8IU68 726 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 TBC1D21Q8IYX1 336 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 UBR7Q8N806 425 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 OR2M4Q96R27 311 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 HMG20AQ9NP66 347 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 PTGFRNQ9P2B2 879 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 SATB2Q9UPW6 733 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 TIMM22Q9Y584 194 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 A0A0D9SEW6 157 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 NBNO60934 754 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 SIN3BO75182 1162 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 SEMA4FO95754 770 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 UROSP10746 265 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 ELOAQ14241 798 aaKnown RBP11.09□□□□□ -0.63
PTPRK-221ENST00000532331 PDK3Q15120 406 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 TFGQ92734 400 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-221ENST00000532331 ARHGEF3Q9NR81 526 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 TOR4AQ9NXH8 423 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 C19orf25Q9UFG5 118 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-221ENST00000532331 TOP3BO95985 862 aaKnown RBP11.09□□□□□ -0.63
PTPRK-221ENST00000532331 CEBPBP17676 345 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 C5AR1P21730 350 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 STK19P49842 368 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-221ENST00000532331 MAPK11Q15759 364 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 CST6Q15828 149 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 MRPL39Q9NYK5 338 aaKnown RBP11.09□□□□□ -0.63
PTPRK-221ENST00000532331 CRNNQ9UBG3 495 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-221ENST00000532331 H0YC42 278 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 M0QZQ0 153 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 SOCS5O75159 536 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 UGT2B17O75795 530 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 ATP1A4Q13733 1029 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 LARS2Q15031 903 aaKnown RBP11.09□□□□□ -0.63
PTPRK-221ENST00000532331 TAB1Q15750 504 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 PRAMEF14Q5SWL7 426 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 PRAMEF13Q5VWM6 474 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 FSTL4Q6MZW2 842 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 KLHDC9Q8NEP7 349 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 OR7A2PQ8NGA2 310 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 SPOCK2Q92563 424 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 SALL4Q9UJQ4 1053 aa11.09□□□□□ -0.63
PTPRK-221ENST00000532331 BAZ2AQ9UIF9 1905 aaKnown RBP11.08□□□□□ -0.64
PTPRK-221ENST00000532331 CAPN14A8MX76 684 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 WWP2O00308 870 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 IFNGP01579 166 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 PCSK2P16519 638 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 PSMD7P51665 324 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 NRG1Q02297 640 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-221ENST00000532331 METTL21CQ5VZV1 264 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 TRPV1Q8NER1 839 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 RPLP0P6Q8NHW5 317 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 MR1Q95460 341 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 TAPBPLQ9BX59 468 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 SSU72Q9NP77 194 aaKnown RBP11.08□□□□□ -0.64
PTPRK-221ENST00000532331 STON1Q9Y6Q2 735 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 LILRB3O75022 631 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 APBB3O95704 486 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 CAPN1P07384 714 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 JUPP14923 745 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 NOVP48745 357 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 HNRNPKP61978 463 aaKnown RBP eCLIP11.08□□□□□ -0.645e-7■■■■□ 23.3
PTPRK-221ENST00000532331 PRR5P85299 388 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 PRRT3Q5FWE3 981 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 FAM171BQ6P995 826 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 DENND6AQ8IWF6 608 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 OR2T3Q8NH03 318 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 RNASE11Q8TAA1 199 aaKnown RBP11.08□□□□□ -0.64
PTPRK-221ENST00000532331 XAGE5Q8WWM1 108 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 SMPDL3AQ92484 453 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 CDKN2AIPNLQ96HQ2 116 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 APOBEC3BQ9UH17 382 aaKnown RBP11.08□□□□□ -0.64
PTPRK-221ENST00000532331 TTC34A8MYJ7 566 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 G3V2T6 193 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 H7C0S8 307 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 AXIN1O15169 862 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 IL23RQ5VWK5 629 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 ISLR2Q6UXK2 745 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 HEATR4Q86WZ0 1026 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 PEX5LQ8IYB4 626 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 LIX1Q8N485 282 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 AMER2Q8N7J2 671 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 TMEM109Q9BVC6 243 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 R3HDMLQ9H3Y0 253 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 RC3H2Q9HBD1 1191 aaKnown RBP11.08□□□□□ -0.64
PTPRK-221ENST00000532331 ARL8BQ9NVJ2 186 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 SEC14L3Q9UDX4 400 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 SCML1Q9UN30 329 aa11.08□□□□□ -0.64
PTPRK-221ENST00000532331 LIN7AO14910 233 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-221ENST00000532331 VEGFDO43915 354 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms