RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 GALNT16Q8N428 558 aa16.75■□□□□ 0.27
PKP3-208ENST00000531857 TRIM58Q8NG06 486 aa16.75■□□□□ 0.27
PKP3-208ENST00000531857 OR13C4Q8NGS5 318 aa16.75■□□□□ 0.27
PKP3-208ENST00000531857 DHRS4Q9BTZ2 278 aa16.75■□□□□ 0.27
PKP3-208ENST00000531857 SPRTNQ9H040 489 aaPredicted RBP16.75■□□□□ 0.27
PKP3-208ENST00000531857 ILKAPQ9H0C8 392 aaPredicted RBP16.75■□□□□ 0.27
PKP3-208ENST00000531857 ZNF552Q9H707 407 aaPredicted RBP16.75■□□□□ 0.27
PKP3-208ENST00000531857 ACTR10Q9NZ32 417 aa16.75■□□□□ 0.27
PKP3-208ENST00000531857 CRLS1Q9UJA2 301 aa16.75■□□□□ 0.27
PKP3-208ENST00000531857 INTUQ9ULD6 942 aa16.75■□□□□ 0.27
PKP3-208ENST00000531857 PTRH2Q9Y3E5 179 aaKnown RBP16.75■□□□□ 0.27
PKP3-208ENST00000531857 ZGRF1Q86YA3 2104 aa16.75■□□□□ 0.27
PKP3-208ENST00000531857 C5orf60A6NFR6 353 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 C2orf74A8MZ97 194 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 SPOPO43791 374 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 CNOT3O75175 753 aaKnown RBP16.74■□□□□ 0.27
PKP3-208ENST00000531857 HBQ1P09105 142 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 RALBP11234 206 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 ATP1B2P14415 290 aaPredicted RBP16.74■□□□□ 0.27
PKP3-208ENST00000531857 HADHAP40939 763 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 CDKN1CP49918 316 aaPredicted RBP16.74■□□□□ 0.27
PKP3-208ENST00000531857 MSLNQ13421 630 aaPredicted RBP16.74■□□□□ 0.27
PKP3-208ENST00000531857 DEFB110Q30KQ9 67 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 LYPLAL1Q5VWZ2 237 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 IGFL3Q6UXB1 125 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 TRIM73Q86UV7 250 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 AMIGO1Q86WK6 493 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 NXPE1Q8N323 547 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 CEP112Q8N8E3 955 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 ACRBPQ8NEB7 543 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 FER1L6-AS2Q96M78 137 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 ALS2CR12Q96Q35 445 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 BARD1Q99728 777 aaKnown RBP16.74■□□□□ 0.27
PKP3-208ENST00000531857 NAPGQ99747 312 aaPredicted RBP16.74■□□□□ 0.27
PKP3-208ENST00000531857 HGH1Q9BTY7 390 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 GOLPH3Q9H4A6 298 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 LZTFL1Q9NQ48 299 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 TRHDEQ9UKU6 1024 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 CDYLQ9Y232 598 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 PCDHA13Q9Y5I0 950 aa16.74■□□□□ 0.27
PKP3-208ENST00000531857 POLEQ07864 2286 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 hCG_1818297A0A087WSY0 165 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 C17orf113A0A1B0GUU1 675 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 BTNL10A8MVZ5 291 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 OR2B3O76000 313 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 URI1O94763 535 aaPredicted RBP16.73■□□□□ 0.27
PKP3-208ENST00000531857 TUBBP07437 444 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 RBL1P28749 1068 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 ADRA1AP35348 466 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 FOLR3P41439 243 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 MAGEA1P43355 309 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 GABRA4P48169 554 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 GEMP55040 296 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 BOP1Q14137 746 aaKnown RBP16.73■□□□□ 0.27
PKP3-208ENST00000531857 SLC9A5Q14940 896 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 ZIC1Q15915 447 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 TFDP3Q5H9I0 405 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 C1QL3Q5VWW1 255 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 SPESP1Q6UW49 350 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 PPP1R32Q7Z5V6 425 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 CUZD1Q86UP6 607 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 TICAM1Q8IUC6 712 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 GPR135Q8IZ08 494 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 CLEC1AQ8NC01 280 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 MNS1Q8NEH6 495 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 IP6K3Q96PC2 410 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 GBP5Q96PP8 586 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 COPS8Q99627 209 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 GBA3Q9H227 469 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 P4HTMQ9NXG6 502 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 ICKQ9UPZ9 632 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 CSAG2Q9Y5P2 127 aa16.73■□□□□ 0.27
PKP3-208ENST00000531857 COPG1Q9Y678 874 aaKnown RBP16.73■□□□□ 0.27
PKP3-208ENST00000531857 EFCAB8A8MWE9 144 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 HACD1B0YJ81 288 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 IFRD1O00458 451 aaPredicted RBP16.72■□□□□ 0.27
PKP3-208ENST00000531857 PEX12O00623 359 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 ALPPP05187 535 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 GLRBP48167 497 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 CD151P48509 253 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 MARCKSL1P49006 195 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 ZNF140P52738 457 aaPredicted RBP16.72■□□□□ 0.27
PKP3-208ENST00000531857 WHAMMP3Q1A5X7 153 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 RHBDD2Q6NTF9 364 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 Q6ZS92 163 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 SNX20Q7Z614 316 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 C19orf47Q8N9M1 422 aaKnown RBP16.72■□□□□ 0.27
PKP3-208ENST00000531857 TTC13Q8NBP0 860 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 OR2Y1Q8NGV0 311 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 TFGQ92734 400 aaPredicted RBP16.72■□□□□ 0.27
PKP3-208ENST00000531857 N4BP2L2Q92802 583 aaPredicted RBP16.72■□□□□ 0.27
PKP3-208ENST00000531857 ULK4Q96C45 1275 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 MVB12BQ9H7P6 319 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 DHCR7Q9UBM7 475 aaKnown RBP16.72■□□□□ 0.27
PKP3-208ENST00000531857 GPN3Q9UHW5 284 aaPredicted RBP16.72■□□□□ 0.27
PKP3-208ENST00000531857 CDC23Q9UJX2 597 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 PCDHGA10Q9Y5H3 936 aa16.72■□□□□ 0.27
PKP3-208ENST00000531857 CFAP99D6REC4 459 aa16.71■□□□□ 0.27
PKP3-208ENST00000531857 PSTPIP1O43586 416 aa16.71■□□□□ 0.27
PKP3-208ENST00000531857 ANXA9O76027 345 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms