RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 CAGE1Q8TC20 777 aa6.23□□□□□ -1.41
ATM-216ENST00000531525 WASF1Q92558 559 aa6.23□□□□□ -1.41
ATM-216ENST00000531525 NAP1L3Q99457 506 aaPredicted RBP6.23□□□□□ -1.41
ATM-216ENST00000531525 MEIS3Q99687 375 aa6.23□□□□□ -1.41
ATM-216ENST00000531525 CPPED1Q9BRF8 314 aaPredicted RBP6.23□□□□□ -1.41
ATM-216ENST00000531525 C1QTNF5Q9BXJ0 243 aa6.23□□□□□ -1.41
ATM-216ENST00000531525 RPF1Q9H9Y2 349 aaKnown RBP6.23□□□□□ -1.41
ATM-216ENST00000531525 SLC28A3Q9HAS3 691 aa6.23□□□□□ -1.41
ATM-216ENST00000531525 TRPV5Q9NQA5 729 aa6.23□□□□□ -1.41
ATM-216ENST00000531525 GLRX2Q9NS18 164 aa6.23□□□□□ -1.41
ATM-216ENST00000531525 SMPD3Q9NY59 655 aaPredicted RBP6.23□□□□□ -1.41
ATM-216ENST00000531525 ZMAT5Q9UDW3 170 aaKnown RBP6.23□□□□□ -1.41
ATM-216ENST00000531525 BAIAP2L1Q9UHR4 511 aa6.23□□□□□ -1.41
ATM-216ENST00000531525 TLK1Q9UKI8 766 aa6.23□□□□□ -1.41
ATM-216ENST00000531525 WBP11Q9Y2W2 641 aaKnown RBP6.23□□□□□ -1.41
ATM-216ENST00000531525 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.22□□□□□ -1.41
ATM-216ENST00000531525 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.22□□□□□ -1.41
ATM-216ENST00000531525 C1orf226A1L170 272 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 WIPF3A6NGB9 483 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 M0QX08 132 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 PLK4O00444 970 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 NUDT21O43809 227 aaKnown RBP6.22□□□□□ -1.41
ATM-216ENST00000531525 SERPINC1P01008 464 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 UQCRFS1P1P0C7P4 283 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 HNRNPA2B1P22626 353 aaKnown RBP6.22□□□□□ -1.41
ATM-216ENST00000531525 GCSHP23434 173 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 FRKP42685 505 aaPredicted RBP6.22□□□□□ -1.41
ATM-216ENST00000531525 MTTPP55157 894 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 RAE1P78406 368 aaKnown RBP6.22□□□□□ -1.41
ATM-216ENST00000531525 KLF10Q13118 480 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 PLD1Q13393 1074 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 MTX1Q13505 466 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 DNASE1L3Q13609 305 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 PTPRCAPQ14761 206 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 RPE65Q16518 533 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 LRRC8EQ6NSJ5 796 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 SYVN1Q86TM6 617 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 ADIPOR2Q86V24 386 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 LRRC43Q8N309 656 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 CLEC1AQ8NC01 280 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 ACER1Q8TDN7 264 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 NSMAFQ92636 917 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 GLG1Q92896 1179 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 ARSGQ96EG1 525 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 CCDC51Q96ER9 411 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 CNOT6LQ96LI5 555 aaKnown RBP6.22□□□□□ -1.41
ATM-216ENST00000531525 RBM14Q96PK6 669 aaKnown RBP6.22□□□□□ -1.41
ATM-216ENST00000531525 TMEM117Q9H0C3 514 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 TKTL2Q9H0I9 626 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 PLEKHA4Q9H4M7 779 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 WDR26Q9H7D7 661 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 RNPEPL1Q9HAU8 725 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 PRMT7Q9NVM4 692 aaPredicted RBP6.22□□□□□ -1.41
ATM-216ENST00000531525 IL17BQ9UHF5 180 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 KCNK6Q9Y257 313 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 B3GNT3Q9Y2A9 372 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 DUSP10Q9Y6W6 482 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 MYH7P12883 1935 aa6.22□□□□□ -1.41
ATM-216ENST00000531525 COL4A4P53420 1690 aaPredicted RBP6.22□□□□□ -1.41
ATM-216ENST00000531525 GREB1LQ9C091 1923 aaPredicted RBP6.21□□□□□ -1.41
ATM-216ENST00000531525 TRBV2A0A0J9YWF9 115 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 C13orf42A0A1B0GVH6 325 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 TARSL2A2RTX5 802 aaKnown RBP6.21□□□□□ -1.42
ATM-216ENST00000531525 XKRY2A2RUG3 117 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 TO15178 435 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 SPRY2O43597 315 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 TRIAP1O43715 76 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 KIF1CO43896 1103 aaKnown RBP6.21□□□□□ -1.42
ATM-216ENST00000531525 NEMFO60524 1076 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 SPAG6O75602 509 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 LINGO3P0C6S8 592 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 IGFBP2P18065 325 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 LBPP18428 481 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 ANXA11P50995 505 aaKnown RBP6.21□□□□□ -1.42
ATM-216ENST00000531525 USH1GQ495M9 461 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 ZNF789Q5FWF6 425 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 ARL13AQ5H913 290 aaPredicted RBP6.21□□□□□ -1.42
ATM-216ENST00000531525 PRAMEF19Q5SWL8 479 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 PM20D1Q6GTS8 502 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 SLC27A1Q6PCB7 646 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 KYAT3Q6YP21 454 aaKnown RBP6.21□□□□□ -1.42
ATM-216ENST00000531525 ANKRD33Q7Z3H0 272 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 PIGWQ7Z7B1 504 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 ADAMTSL2Q86TH1 951 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 CAMK1DQ8IU85 385 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 ZNF595Q8IYB9 648 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 ZCCHC7Q8N3Z6 543 aaKnown RBP6.21□□□□□ -1.42
ATM-216ENST00000531525 ZCCHC9Q8N567 271 aaKnown RBP6.21□□□□□ -1.42
ATM-216ENST00000531525 SLC9A6Q92581 669 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 FAM136AQ96C01 138 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 AP2M1Q96CW1 435 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 DTD2Q96FN9 168 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 TMEM168Q9H0V1 697 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 SFXN1Q9H9B4 322 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 GLOD4Q9HC38 313 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 TRIM36Q9NQ86 728 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 TBX21Q9UL17 535 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 PKP3Q9Y446 797 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 TANC1Q9C0D5 1861 aa6.21□□□□□ -1.42
ATM-216ENST00000531525 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms