RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 NLE1Q9NVX2 485 aaPredicted RBP15.29■□□□□ 0.04
CHMP4A-204ENST00000530996 DHCR7Q9UBM7 475 aaKnown RBP15.29■□□□□ 0.04
CHMP4A-204ENST00000530996 PLAGL1Q9UM63 463 aa15.29■□□□□ 0.04
CHMP4A-204ENST00000530996 SRPK3Q9UPE1 567 aa15.29■□□□□ 0.04
CHMP4A-204ENST00000530996 AP1M2Q9Y6Q5 423 aa15.29■□□□□ 0.04
CHMP4A-204ENST00000530996 IGLV3-16A0A075B6K0 115 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 TRBV5-4A0A0C4DH59 114 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 A0A0J9YY10 115 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 GOLGA6L9A6NEM1 432 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 QSOX1O00391 747 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 LIN7AO14910 233 aaPredicted RBP15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 KRT86O43790 486 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 KDM1AO60341 852 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 AP2A2O94973 939 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 CHRM5P08912 532 aaPredicted RBP15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 GSTM1P09488 218 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 RNF224P0DH78 156 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 CBSLP0DN79 551 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 PTPN7P35236 360 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 CBSP35520 551 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 GSTM4Q03013 218 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 TBX2Q13207 712 aaPredicted RBP15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 CYP2A13Q16696 494 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 AADACL2Q6P093 401 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 UNC5AQ6ZN44 842 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 TMTC1Q8IUR5 882 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 CCDC170Q8IYT3 715 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 ZNF655Q8N720 491 aaPredicted RBP15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 TC2NQ8N9U0 490 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 FAM71DQ8N9W8 422 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 PROKR1Q8TCW9 393 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 TM9SF4Q92544 642 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 TRIM5Q9C035 493 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 FAM60AQ9NP50 221 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 CDYLQ9Y232 598 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 EFR3BQ9Y2G0 817 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 PCDHA3Q9Y5H8 950 aa15.28■□□□□ 0.04
CHMP4A-204ENST00000530996 SPTBN1Q01082 2364 aaKnown RBP15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 ISM1B1AKI9 464 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 IGHEP01854 428 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 MSNP26038 577 aaKnown RBP15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 NSG1P42857 185 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 CSE1LP55060 971 aaKnown RBP15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 DCDP81605 110 aaKnown RBP15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 ELOAQ14241 798 aaKnown RBP15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 SKOR2Q2VWA4 1001 aaPredicted RBP15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 P3H1Q32P28 736 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 ZNF658BQ4V348 819 aaPredicted RBP15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 DCAF10Q5QP82 559 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 RHBDD2Q6NTF9 364 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 NAPRTQ6XQN6 538 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 PIANPQ8IYJ0 282 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 GALNT16Q8N428 558 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 C19orf60Q96EN9 201 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 C19orf43Q9BQ61 176 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 NDC1Q9BTX1 674 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 AP1M1Q9BXS5 423 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 SPRTNQ9H040 489 aaPredicted RBP15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 ARNT2Q9HBZ2 717 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 SPHK1Q9NYA1 384 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 IMPACTQ9P2X3 320 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 POLG2Q9UHN1 485 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 B3GNT3Q9Y2A9 372 aa15.27■□□□□ 0.04
CHMP4A-204ENST00000530996 OR51F1A6NGY5 319 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 H7C0S8 307 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 KLHL41O60662 606 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 DDAH2O95865 285 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 ITGA3P26006 1051 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 FOXL2P58012 376 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 MSLNQ13421 630 aaPredicted RBP15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 SSPNQ14714 243 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 MYBPC3Q14896 1274 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 ZIC1Q15915 447 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 ZNF385CQ66K41 422 aaPredicted RBP15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 TAX1BP1Q86VP1 789 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 TBC1D21Q8IYX1 336 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 CISD2Q8N5K1 135 aaKnown RBP15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 STYXQ8WUJ0 223 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 SNRNP40Q96DI7 357 aaKnown RBP15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 GBP5Q96PP8 586 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 OR2A14Q96R47 310 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 ASF1BQ9NVP2 202 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 P4HTMQ9NXG6 502 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 OR6C2Q9NZP2 312 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 C5AR2Q9P296 337 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 PRSS21Q9Y6M0 314 aa15.26■□□□□ 0.03
CHMP4A-204ENST00000530996 SOWAHDA6NJG2 315 aa15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 KLF7O75840 302 aaPredicted RBP15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 IPO13O94829 963 aaKnown RBP15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 GAS8O95995 478 aa15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 CD63P08962 238 aa15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 OR56A5P0C7T3 313 aa15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 ITIH4Q14624 930 aa15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 PARP6Q2NL67 630 aa15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 NKAIN1Q4KMZ8 207 aa15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 CCDC38Q502W7 563 aa15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 TLDC1Q6P9B6 456 aa15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 ZADH2Q8N4Q0 377 aa15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 DNAAF3Q8N9W5 541 aa15.25■□□□□ 0.03
CHMP4A-204ENST00000530996 OR2Y1Q8NGV0 311 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms