RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 SELENBP1Q13228 472 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 TEAD2Q15562 447 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 ASTLQ6HA08 431 aaPredicted RBP11.33□□□□□ -0.6
USP35-207ENST00000530546 GPRIN3Q6ZVF9 776 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 ERMP1Q7Z2K6 904 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 RETREG3Q86VR2 466 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 OR56A4Q8NGH8 313 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 LILRB4Q8NHJ6 448 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 PPWD1Q96BP3 646 aaKnown RBP11.33□□□□□ -0.6
USP35-207ENST00000530546 NRBF2Q96F24 287 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 SH3YL1Q96HL8 342 aaPredicted RBP11.33□□□□□ -0.6
USP35-207ENST00000530546 TRIM8Q9BZR9 551 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 PRORSD1PA6NEY8 169 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 STX16O14662 325 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 TRIM24O15164 1050 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 JRKO75564 520 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 SEC14L2O76054 403 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 CHEK2O96017 543 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 GLUD1P00367 558 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 UGT2B4P06133 528 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 TGM1P22735 817 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 IDUAP35475 653 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 HLCSP50747 726 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 NTHL1P78549 312 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 CAPRIN1Q14444 709 aaKnown RBP11.33□□□□□ -0.6
USP35-207ENST00000530546 FUT11Q495W5 492 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 ZNF697Q5TEC3 545 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 TXNDC11Q6PKC3 985 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 CERS6Q6ZMG9 384 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 SNX20Q7Z614 316 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 PHYKPLQ8IUZ5 450 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 RBFAQ8N0V3 343 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 CPXM2Q8N436 756 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 NAT16Q8N8M0 369 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 EGFL8Q99944 293 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 LINC00597Q9H2U6 94 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 CXXC1Q9P0U4 656 aaPredicted RBP11.33□□□□□ -0.6
USP35-207ENST00000530546 POU2F3Q9UKI9 436 aa11.33□□□□□ -0.6
USP35-207ENST00000530546 MYOFQ9NZM1 2061 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 CENPBD1B2RD01 187 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 SLC22A1O15245 554 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 S100BP04271 92 aaPredicted RBP11.32□□□□□ -0.6
USP35-207ENST00000530546 CKMT2P17540 419 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 CAPN3P20807 821 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 WEE1P30291 646 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 SOX11P35716 441 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 CASP2P42575 452 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 HSPA7P48741 367 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 SNRPD1P62314 119 aaKnown RBP11.32□□□□□ -0.6
USP35-207ENST00000530546 CREMQ03060 361 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 GPR26Q8NDV2 337 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 BBS2Q9BXC9 721 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 NSUN3Q9H649 340 aaKnown RBP11.32□□□□□ -0.6
USP35-207ENST00000530546 CD84Q9UIB8 345 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 ZMYM5Q9UJ78 669 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 SARDHQ9UL12 918 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 PCDHB1Q9Y5F3 818 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 PLXNA4Q9HCM2 1894 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 E2F3O00716 465 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 DLGAP1O14490 977 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 ANGPT2O15123 496 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 EFCAB14O75071 495 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 MLYCDO95822 493 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 SPAM1P38567 509 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 GDF5P43026 501 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 ERVPABLB-1P60509 514 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 E2F2Q14209 437 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 LRRC66Q68CR7 880 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 C22orf39Q6P5X5 142 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 TTC23LQ6PF05 361 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 CRTC1Q6UUV9 634 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 DPY19L3Q6ZPD9 716 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 Q6ZVU0 165 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 NEK10Q6ZWH5 1172 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 CHST14Q8NCH0 376 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 ABHD11Q8NFV4 315 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 CEP44Q9C0F1 390 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 SPAG4Q9NPE6 437 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 THG1LQ9NWX6 298 aaKnown RBP11.32□□□□□ -0.6
USP35-207ENST00000530546 PKD2L2Q9NZM6 624 aa11.32□□□□□ -0.6
USP35-207ENST00000530546 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.31□□□□□ -0.6
USP35-207ENST00000530546 AREL1O15033 823 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 KLK8O60259 260 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 SOCS5O75159 536 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 UROSP10746 265 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 ACRV1P26436 265 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 CTNNB1P35222 781 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 OPRL1P41146 370 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 MAPK8P45983 427 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 PIK3CGP48736 1102 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 HTR6P50406 440 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 SPCS2Q15005 226 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 CDKN3Q16667 212 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 FAM209AQ5JX71 171 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 LETMD1Q6P1Q0 360 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 DET1Q7L5Y6 550 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 SPRED2Q7Z698 418 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 ADGRG2Q8IZP9 1017 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 OR7G1Q8NGA0 311 aa11.31□□□□□ -0.6
USP35-207ENST00000530546 OR2T11Q8NH01 316 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms