RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 GOT2P00505 430 aaKnown RBP13.74□□□□□ -0.21
CAPN1-212ENST00000527887 RPN2P04844 631 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 APRTP07741 180 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 CD63P08962 238 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 RORAP35398 523 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 ITGA1P56199 1179 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 GPS2Q13227 327 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 CCDC38Q502W7 563 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 FASTKD1Q53R41 847 aaKnown RBP13.74□□□□□ -0.21
CAPN1-212ENST00000527887 PCID2Q5JVF3 399 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 FAM199XQ6PEV8 388 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-212ENST00000527887 FBXO38Q6PIJ6 1188 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 SPESP1Q6UW49 350 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 GPR135Q8IZ08 494 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 SLC35F6Q8N357 371 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 TAB3Q8N5C8 712 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-212ENST00000527887 TEX19Q8NA77 164 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 SLC38A9Q8NBW4 561 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 PPHLN1Q8NEY8 458 aaKnown RBP13.74□□□□□ -0.21
CAPN1-212ENST00000527887 OR6P1Q8NGX9 317 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 C1orf54Q8WWF1 131 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 ASZ1Q8WWH4 475 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 ZNF592Q92610 1267 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 N4BP2L2Q92802 583 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-212ENST00000527887 HGH1Q9BTY7 390 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 DHRS4Q9BTZ2 278 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 CARD6Q9BX69 1037 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 SLC7A5P2Q9GIP4 190 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 EPN3Q9H201 632 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 CHST8Q9H2A9 424 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 ACTR5Q9H9F9 607 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-212ENST00000527887 EIF2B3Q9NR50 452 aaKnown RBP13.74□□□□□ -0.21
CAPN1-212ENST00000527887 HOMER3Q9NSC5 361 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 TLK1Q9UKI8 766 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 TCAF1Q9Y4C2 921 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 PCDHGB7Q9Y5F8 929 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 PRSS21Q9Y6M0 314 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 FLNCQ14315 2725 aa13.74□□□□□ -0.21
CAPN1-212ENST00000527887 OR51F1A6NGY5 319 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 BHMG1C9JSJ3 638 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-212ENST00000527887 CES2O00748 559 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 AGXTP21549 392 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 TTPAP49638 278 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 CDK16Q00536 496 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 ABRQ12979 859 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 KIR2DS3Q14952 304 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 ZNF789Q5FWF6 425 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 ARMC3Q5W041 872 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 UNC5AQ6ZN44 842 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 ASB18Q6ZVZ8 466 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 OR5AR1Q8NGP9 310 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 OR1L3Q8NH93 324 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 SLC22A18Q96BI1 424 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 RNF31Q96EP0 1072 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 XKR8Q9H6D3 395 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 PCMTD2Q9NV79 361 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 RNF14Q9UBS8 474 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 SNX7Q9UNH6 387 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 ICKQ9UPZ9 632 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 TP53TG5Q9Y2B4 290 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 PCDHGA9Q9Y5G4 932 aaKnown RBP13.73□□□□□ -0.21
CAPN1-212ENST00000527887 MRFAP1Q9Y605 127 aa13.73□□□□□ -0.21
CAPN1-212ENST00000527887 PYCARD-AS1I3L0S3 204 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 PRMT5O14744 637 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-212ENST00000527887 KPNA5O15131 536 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 GPC4O75487 556 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 APOA4P06727 396 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 CHRM5P08912 532 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-212ENST00000527887 TCP1P17987 556 aaKnown RBP13.72□□□□□ -0.21
CAPN1-212ENST00000527887 GRIA1P42261 906 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 NPY2RP49146 381 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 FOXK1P85037 733 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 SLC5A12Q1EHB4 618 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 CDHR3Q6ZTQ4 885 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 ZNF534Q76KX8 674 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 TMEM135Q86UB9 458 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 LRRC6Q86X45 466 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 HPS6Q86YV9 775 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 SYTL1Q8IYJ3 562 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 SLC22A15Q8IZD6 547 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 MPP5Q8N3R9 675 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 C19orf47Q8N9M1 422 aaKnown RBP13.72□□□□□ -0.21
CAPN1-212ENST00000527887 IP6K3Q96PC2 410 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 OR2A14Q96R47 310 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 AP1M1Q9BXS5 423 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 IL22Q9GZX6 179 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 BFARQ9NZS9 450 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 SLC2A6Q9UGQ3 507 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 CDC23Q9UJX2 597 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 TCFL5Q9UL49 500 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 G3BP2Q9UN86 482 aaKnown RBP13.72□□□□□ -0.21
CAPN1-212ENST00000527887 PADI2Q9Y2J8 665 aa13.72□□□□□ -0.21
CAPN1-212ENST00000527887 A0A0J9YY10 115 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 C9J4A7 227 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 FANCGO15287 622 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 ZNF749O43361 778 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 OR1I1O60431 355 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 URI1O94763 535 aaPredicted RBP13.71□□□□□ -0.21
CAPN1-212ENST00000527887 UGT2B7P16662 529 aa13.71□□□□□ -0.21
CAPN1-212ENST00000527887 CCR7P32248 378 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms