RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 UBE2Q2Q8WVN8 375 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 PTERQ96BW5 349 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 ATP13A2Q9NQ11 1180 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 ZDHHC3Q9NYG2 299 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 TDRKHQ9Y2W6 561 aaKnown RBP25.03■■□□□ 1.6
PVT1-219ENST00000523427 CSAG2Q9Y5P2 127 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 ALG6Q9Y672 507 aa25.03■■□□□ 1.6
PVT1-219ENST00000523427 ABCA12Q86UK0 2595 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 AGAP14A8MT82 685 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 ALOX12BO75342 701 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 IPO13O94829 963 aaKnown RBP25.02■■□□□ 1.6
PVT1-219ENST00000523427 IGHEP01854 428 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 ADRA1AP35348 466 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 CD151P48509 253 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 PRPSAP1Q14558 356 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 HIF1AQ16665 826 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 C1QL3Q5VWW1 255 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 RHBDD2Q6NTF9 364 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 UNC5AQ6ZN44 842 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 SERPINA9Q86WD7 417 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 OR5AR1Q8NGP9 310 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.02■■□□□ 1.62e-6■■■■□ 20.7
PVT1-219ENST00000523427 VPS37BQ9H9H4 285 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 AGPAT4Q9NRZ5 378 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 SPHK1Q9NYA1 384 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 PCDHGA10Q9Y5H3 936 aa25.02■■□□□ 1.6
PVT1-219ENST00000523427 FER1L5A0AVI2 2057 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 DIDO1Q9BTC0 2240 aaKnown RBP25.01■■□□□ 1.59
PVT1-219ENST00000523427 ZSCAN9O15535 394 aaPredicted RBP25.01■■□□□ 1.59
PVT1-219ENST00000523427 KLHL41O60662 606 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 ALAS2P22557 587 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 TNFRSF8P28908 595 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 ZNF140P52738 457 aaPredicted RBP25.01■■□□□ 1.59
PVT1-219ENST00000523427 NKAIN1Q4KMZ8 207 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 CRB2Q5IJ48 1285 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 Q6ZS92 163 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 RCOR2Q8IZ40 523 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 OR2A14Q96R47 310 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 FAM118BQ9BPY3 351 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 AP1M1Q9BXS5 423 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 ABHD10Q9NUJ1 306 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 PLAGL1Q9UM63 463 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 ASF1AQ9Y294 204 aa25.01■■□□□ 1.59
PVT1-219ENST00000523427 UMODP07911 640 aa25■■□□□ 1.59
PVT1-219ENST00000523427 ANKRD20A2Q5SQ80 823 aa25■■□□□ 1.59
PVT1-219ENST00000523427 ANKRD20A1Q5TYW2 823 aa25■■□□□ 1.59
PVT1-219ENST00000523427 ANKRD20A3Q5VUR7 823 aa25■■□□□ 1.59
PVT1-219ENST00000523427 NAPRTQ6XQN6 538 aa25■■□□□ 1.59
PVT1-219ENST00000523427 FAM20CQ8IXL6 584 aa25■■□□□ 1.59
PVT1-219ENST00000523427 PROKR1Q8TCW9 393 aa25■■□□□ 1.59
PVT1-219ENST00000523427 DNAJC1Q96KC8 554 aaKnown RBP25■■□□□ 1.59
PVT1-219ENST00000523427 OSGIN2Q9Y236 505 aa25■■□□□ 1.59
PVT1-219ENST00000523427 AAR2Q9Y312 384 aaKnown RBP25■■□□□ 1.59
PVT1-219ENST00000523427 ARHGAP10A1A4S6 786 aa24.99■■□□□ 1.59
PVT1-219ENST00000523427 ISM1B1AKI9 464 aa24.99■■□□□ 1.59
PVT1-219ENST00000523427 H3BMH7 237 aa24.99■■□□□ 1.59
PVT1-219ENST00000523427 LRRTM2O43300 516 aa24.99■■□□□ 1.59
PVT1-219ENST00000523427 CHRM5P08912 532 aaPredicted RBP24.99■■□□□ 1.59
PVT1-219ENST00000523427 SHMT2P34897 504 aa24.99■■□□□ 1.59
PVT1-219ENST00000523427 GABRA4P48169 554 aa24.99■■□□□ 1.59
PVT1-219ENST00000523427 POLEQ07864 2286 aa24.99■■□□□ 1.59
PVT1-219ENST00000523427 RPA4Q13156 261 aa24.99■■□□□ 1.59
PVT1-219ENST00000523427 ZNF658BQ4V348 819 aaPredicted RBP24.99■■□□□ 1.59
PVT1-219ENST00000523427 KATNAL2Q8IYT4 538 aa24.99■■□□□ 1.59
PVT1-219ENST00000523427 FERMT1Q9BQL6 677 aa24.99■■□□□ 1.59
PVT1-219ENST00000523427 NDC1Q9BTX1 674 aa24.99■■□□□ 1.59
PVT1-219ENST00000523427 SMARCAL1Q9NZC9 954 aa24.99■■□□□ 1.59
PVT1-219ENST00000523427 CD63P08962 238 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 TPM1P09493 284 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 ACRV1P26436 265 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 MSLNQ13421 630 aaPredicted RBP24.98■■□□□ 1.59
PVT1-219ENST00000523427 TRIM14Q14142 442 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 GPR33Q49SQ1 333 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 BBS12Q6ZW61 710 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 TICAM1Q8IUC6 712 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 CCDC110Q8TBZ0 833 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 CNDP1Q96KN2 507 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 TBL1YQ9BQ87 522 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 FBXL4Q9UKA2 621 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 SRPK3Q9UPE1 567 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 KLHL20Q9Y2M5 609 aa24.98■■□□□ 1.59
PVT1-219ENST00000523427 CNTRLQ7Z7A1 2325 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 A0A0J9YY10 115 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 APOC4-APOC2K7ER74 178 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 AGPSO00116 658 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 KCNN4O15554 427 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 APOC2P02655 101 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 TPH1P17752 444 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 CTNNA2P26232 953 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 OTUD4Q01804 1114 aaKnown RBP24.97■■□□□ 1.59
PVT1-219ENST00000523427 MRPL14Q6P1L8 145 aaKnown RBP24.97■■□□□ 1.59
PVT1-219ENST00000523427 TLDC1Q6P9B6 456 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 KCNMB4Q86W47 210 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 ST6GALNAC3Q8NDV1 305 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 DNAJB14Q8TBM8 379 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 ACTL9Q8TC94 416 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 KRT35Q92764 455 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 WDR77Q9BQA1 342 aaPredicted RBP24.97■■□□□ 1.59
PVT1-219ENST00000523427 SLC6A20Q9NP91 592 aa24.97■■□□□ 1.59
PVT1-219ENST00000523427 CDC23Q9UJX2 597 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms