RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 RABEP2Q9H5N1 569 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 SUSD2Q9UGT4 822 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 PTBP2Q9UKA9 531 aaKnown RBP20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 PILRBQ9UKJ0 227 aa20.83■□□□□ 0.92
R3HCC1-208ENST00000522012 TMEM114B3SHH9 223 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 TAPBPO15533 448 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 ITM2AO43736 263 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 LYPLA1O75608 230 aaPredicted RBP20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 CELA2BP08218 269 aaPredicted RBP20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 NME1P15531 152 aaKnown RBP20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 KRT33BQ14525 404 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 UNC50Q53HI1 259 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 DUS1LQ6P1R4 473 aaKnown RBP20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 ABRAXAS1Q6UWZ7 409 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 RPS27LQ71UM5 84 aaKnown RBP20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 FBXO15Q8NCQ5 510 aaPredicted RBP20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 CNDP1Q96KN2 507 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 LRRC61Q9BV99 259 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 FAM107BQ9H098 131 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 EPN3Q9H201 632 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 TRIT1Q9H3H1 467 aaKnown RBP20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 THAP1Q9NVV9 213 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 SCHIP1Q9P0W5 487 aaPredicted RBP20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 TDRKHQ9Y2W6 561 aaKnown RBP20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 PCDHGA2Q9Y5H1 932 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 TNPO3Q9Y5L0 923 aaKnown RBP20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 EML5Q05BV3 1969 aa20.82■□□□□ 0.92
R3HCC1-208ENST00000522012 PIKFYVEQ9Y2I7 2098 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 OR52A4PA6NMU1 304 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 HSPA4LO95757 839 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 EML2O95834 649 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 CCR10P46092 362 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 HSPA7P48741 367 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 PRKG2Q13237 762 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 RCN2Q14257 317 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 RPE65Q16518 533 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 ANKS6Q68DC2 871 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 WASH2PQ6VEQ5 465 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 SYT12Q8IV01 421 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 DCUN1D3Q8IWE4 304 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 TCAIMQ8N3R3 496 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 OR5K2Q8NHB8 316 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 PITPNM3Q9BZ71 974 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 C20orf27Q9GZN8 174 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 DRC3Q9H069 523 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 WASH6PQ9NQA3 447 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 FGFR1OP2Q9NVK5 253 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 TAAR2Q9P1P5 351 aa20.81■□□□□ 0.92
R3HCC1-208ENST00000522012 TRBV23OR9-2A0A075B6M9 112 aa20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 GALR2O43603 387 aaPredicted RBP20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 NPHS1O60500 1241 aa20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 SNNO75324 88 aaPredicted RBP20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 HNMTP50135 292 aa20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 TBC1D21Q8IYX1 336 aa20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 OR9A1PQ8NGU1 263 aa20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 LMX1AQ8TE12 382 aa20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 RAD51AP1Q96B01 352 aa20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 FBXL8Q96CD0 374 aa20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 TMEM79Q9BSE2 394 aa20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 CD244Q9BZW8 370 aa20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 PCOLCE2Q9UKZ9 415 aa20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 ASB1Q9Y576 335 aa20.8■□□□□ 0.92
R3HCC1-208ENST00000522012 MYO1CO00159 1063 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 CCNT2O60583 730 aaKnown RBP20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 EDF1O60869 148 aaKnown RBP20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 TSPAN8P19075 237 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 ARRB2P32121 409 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 GDF5P43026 501 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 CDH13P55290 713 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 OCRLQ01968 901 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 PCBP2Q15366 365 aaKnown RBP eCLIP20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 ELOCQ15369 112 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 KIF19Q2TAC6 998 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 ARL13AQ5H913 290 aaPredicted RBP20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 FRMD7Q6ZUT3 714 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 CPLX4Q7Z7G2 160 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 ALYREFQ86V81 257 aaKnown RBP20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 ATL1Q8WXF7 558 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 NSUN5Q96P11 429 aaKnown RBP20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 HGH1Q9BTY7 390 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 SHCBP1LQ9BZQ2 653 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 ATG10Q9H0Y0 220 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 GSTO2Q9H4Y5 243 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 SPASTQ9UBP0 616 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 PLAGL1Q9UM63 463 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 SNX11Q9Y5W9 270 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 HEBP2Q9Y5Z4 205 aa20.79■□□□□ 0.92
R3HCC1-208ENST00000522012 SRRM3A6NNA2 597 aaPredicted RBP20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 SLC16A8O95907 504 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 CHRNGP07510 517 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 RPS17P08708 135 aaKnown RBP20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 MTHFD1P11586 935 aaKnown RBP20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 F3P13726 295 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 SERPINB5P36952 375 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 HNRNPKP61978 463 aaKnown RBP eCLIP20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 LPAL2Q16609 132 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 ATG14Q6ZNE5 492 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 FAM46DQ8NEK8 389 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 UBTD2Q8WUN7 234 aa20.78■□□□□ 0.92
R3HCC1-208ENST00000522012 C7orf26Q96N11 449 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms