RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ADPRHL2Q9NX46 363 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 IL17BQ9UHF5 180 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 RIPK3Q9Y572 518 aa4.73□□□□□ -1.65
SKP1-208ENST00000521216 SOS1Q07889 1333 aaPredicted RBP4.72□□□□□ -1.65
SKP1-208ENST00000521216 FEZF1A0PJY2 475 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 UBE2CO00762 179 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 SMIM18P0DKX4 95 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 LIFP15018 202 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 ANOS1P23352 680 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 JAK1P23458 1154 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 SLC6A6P31641 620 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 KYNUQ16719 465 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 CRY2Q49AN0 593 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 KLHL26Q53HC5 615 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 KRT80Q6KB66 452 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 LINGO4Q6UY18 593 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 ZBTB49Q6ZSB9 765 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 ARHGAP22Q7Z5H3 698 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 CENPVQ7Z7K6 275 aaPredicted RBP4.72□□□□□ -1.65
SKP1-208ENST00000521216 TMPRSS11BQ86T26 416 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 TMEM139Q8IV31 216 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 KBTBD8Q8NFY9 601 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 CCDC107Q8WV48 283 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 SSMEM1Q8WWF3 244 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 HSD17B8Q92506 261 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 NUP85Q9BW27 656 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 RABEP2Q9H5N1 569 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 SLC52A3Q9NQ40 469 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 CCDC177Q9NQR7 707 aaPredicted RBP4.72□□□□□ -1.65
SKP1-208ENST00000521216 SERINC1Q9NRX5 453 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 INTS10Q9NVR2 710 aaKnown RBP4.72□□□□□ -1.65
SKP1-208ENST00000521216 ZNF624Q9P2J8 865 aaPredicted RBP4.72□□□□□ -1.65
SKP1-208ENST00000521216 NFKBIL1Q9UBC1 381 aaPredicted RBP4.72□□□□□ -1.65
SKP1-208ENST00000521216 CACNG4Q9UBN1 327 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 MTUS1Q9ULD2 1270 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 RNF150Q9ULK6 438 aa4.72□□□□□ -1.65
SKP1-208ENST00000521216 IGLV9-49A0A0B4J1Y8 123 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 TMEM221A6NGB7 291 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 TRIM77I1YAP6 450 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 PCDH7O60245 1069 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 EIF5BO60841 1220 aaKnown RBP4.71□□□□□ -1.66
SKP1-208ENST00000521216 SLCO2B1O94956 709 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 PIGNO95427 931 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 WDPCPO95876 746 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 DANCRP0C864 163 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 CEACAM8P31997 349 aaPredicted RBP4.71□□□□□ -1.66
SKP1-208ENST00000521216 CDKN1AP38936 164 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 MNDAP41218 407 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 MAPK12P53778 367 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 CAMK2DQ13557 499 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 KRTAP24-1Q3LI83 254 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 ZNF628Q5EBL2 1059 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 ELFN2Q5R3F8 820 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 ARMC4Q5T2S8 1044 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 MFSD12Q6NUT3 480 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 SH2D5Q6ZV89 423 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 ZNF843Q8N446 348 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 TDRD5Q8NAT2 981 aaKnown RBP4.71□□□□□ -1.66
SKP1-208ENST00000521216 NPEPL1Q8NDH3 523 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 OLIG1Q8TAK6 271 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 GRHL3Q8TE85 626 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 MRPS27Q92552 414 aaKnown RBP4.71□□□□□ -1.66
SKP1-208ENST00000521216 VPS33AQ96AX1 596 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 RMDN1Q96DB5 314 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 THOC1Q96FV9 657 aaKnown RBP4.71□□□□□ -1.66
SKP1-208ENST00000521216 SENP5Q96HI0 755 aaPredicted RBP4.71□□□□□ -1.66
SKP1-208ENST00000521216 URM1Q9BTM9 101 aaKnown RBP4.71□□□□□ -1.66
SKP1-208ENST00000521216 ARRDC1-AS1Q9H2J1 176 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 MYNNQ9NPC7 610 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 DAPK2Q9UIK4 370 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 CPSF3Q9UKF6 684 aaKnown RBP4.71□□□□□ -1.66
SKP1-208ENST00000521216 C2CD2Q9Y426 696 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 NME7Q9Y5B8 376 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 WDR81Q562E7 1941 aa4.71□□□□□ -1.66
SKP1-208ENST00000521216 A0A1W2PPM1 405 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 ANKRD61A6NGH8 418 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 BLOC1S5-TXNDC5H3BN57 136 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 SLC22A2O15244 555 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 SOCS5O75159 536 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 PRKRAO75569 313 aaKnown RBP4.7□□□□□ -1.66
SKP1-208ENST00000521216 CELF2O95319 508 aaKnown RBP4.7□□□□□ -1.66
SKP1-208ENST00000521216 AMBPP02760 352 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 MPZP25189 248 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 AZGP1P25311 298 aaKnown RBP4.7□□□□□ -1.66
SKP1-208ENST00000521216 EEF1DP29692 281 aaKnown RBP4.7□□□□□ -1.66
SKP1-208ENST00000521216 CHRNB4P30926 498 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 MAP2K2P36507 400 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 RAB28P51157 221 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 PTPRCAPQ14761 206 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 TAF13Q15543 124 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 VWC2Q2TAL6 325 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 ARHGEF16Q5VV41 709 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 MFSD6Q6ZSS7 791 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 DET1Q7L5Y6 550 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 KLHDC8BQ8IXV7 354 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 ATL1Q8WXF7 558 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 HDAC11Q96DB2 347 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 HES6Q96HZ4 224 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 FSD1Q9BTV5 496 aa4.7□□□□□ -1.66
SKP1-208ENST00000521216 ANKRD2Q9GZV1 360 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms