RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ZNF385DQ9H6B1 395 aa11.11□□□□□ -0.63
CLK4-206ENST00000520878 C1orf109Q9NX04 203 aa11.11□□□□□ -0.63
CLK4-206ENST00000520878 LZTS1Q9Y250 596 aa11.11□□□□□ -0.63
CLK4-206ENST00000520878 CFAP20Q9Y6A4 193 aaKnown RBP11.11□□□□□ -0.63
CLK4-206ENST00000520878 ATG2BQ96BY7 2078 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 MGAT4DA6NG13 374 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 MANBAO00462 879 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 DFNA5O60443 496 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
CLK4-206ENST00000520878 CASP9P55211 416 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 BNIP2Q12982 314 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 GK3PQ14409 553 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 ADGRG6Q86SQ4 1221 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 TMPRSS11BQ86T26 416 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 OR2T12Q8NG77 320 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 FAM110BQ8TC76 370 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 SLC13A3Q8WWT9 602 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 HS3ST2Q9Y278 367 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 SAP18O00422 153 aaKnown RBP11.1□□□□□ -0.63
CLK4-206ENST00000520878 IFRD1O00458 451 aaPredicted RBP11.1□□□□□ -0.63
CLK4-206ENST00000520878 WNT9AO14904 365 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 TAPBPO15533 448 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 ATG13O75143 517 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 CLIC3O95833 236 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 SLC6A11P48066 632 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 NAA20P61599 178 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 VAC14Q08AM6 782 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 TMEM214Q6NUQ4 689 aaKnown RBP11.1□□□□□ -0.63
CLK4-206ENST00000520878 C11orf96Q7Z7L8 435 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 ZNF557Q8N988 423 aaPredicted RBP11.1□□□□□ -0.63
CLK4-206ENST00000520878 PROKR1Q8TCW9 393 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 OR8D1Q8WZ84 308 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 CGREF1Q99674 301 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 ADNPQ9H2P0 1102 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 MBD1Q9UIS9 605 aaPredicted RBP11.1□□□□□ -0.63
CLK4-206ENST00000520878 STOML2Q9UJZ1 356 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 ACOT8O14734 319 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 GREM1O60565 184 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 OLFM2O95897 454 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 PDYNP01213 254 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 GBAP04062 536 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 COX7A2P14406 83 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 VARSP26640 1264 aaKnown RBP11.1□□□□□ -0.63
CLK4-206ENST00000520878 CTSCP53634 463 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 EMX2Q04743 252 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 TMEM115Q12893 351 aaPredicted RBP11.1□□□□□ -0.63
CLK4-206ENST00000520878 GRM2Q14416 872 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 CYP2U1Q7Z449 544 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 GPR180Q86V85 440 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 FAM47BQ8NA70 645 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 SLC29A1Q99808 456 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 P2RY13Q9BPV8 354 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 TMEM181Q9P2C4 612 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 DPP7Q9UHL4 492 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 ASF1AQ9Y294 204 aa11.1□□□□□ -0.63
CLK4-206ENST00000520878 HNF4AP41235 474 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 HSPA13P48723 471 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 ATP4BP51164 291 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 OR4D2P58180 307 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 RPS14P62263 151 aaKnown RBP11.09□□□□□ -0.63
CLK4-206ENST00000520878 PCBP2Q15366 365 aaKnown RBP eCLIP11.09□□□□□ -0.63
CLK4-206ENST00000520878 GTDC1Q4AE62 458 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 ANKRD26P1Q6NSI1 321 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 PSRC1Q6PGN9 363 aaPredicted RBP11.09□□□□□ -0.63
CLK4-206ENST00000520878 MACC1Q6ZN28 852 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 HID1Q8IV36 788 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 CELF5Q8N6W0 485 aaKnown RBP11.09□□□□□ -0.63
CLK4-206ENST00000520878 SGK2Q9HBY8 427 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 ADGRE2Q9UHX3 823 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 OAZ3Q9UMX2 235 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 PCDHGB4Q9UN71 923 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 TMEM98Q9Y2Y6 226 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 DOCK4Q8N1I0 1966 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 CLOCKO15516 846 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 FGF19O95750 216 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 LINGO3P0C6S8 592 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 MYCLP1P12525 358 aaPredicted RBP11.09□□□□□ -0.63
CLK4-206ENST00000520878 IL12AP29459 219 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 YBX1P67809 324 aaKnown RBP11.09□□□□□ -0.63
CLK4-206ENST00000520878 TRAP1Q12931 704 aaKnown RBP11.09□□□□□ -0.63
CLK4-206ENST00000520878 TRAF3Q13114 568 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 PLCL1Q15111 1095 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 SUSD1Q6UWL2 747 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 OFCC1Q8IZS5 231 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 PANX1Q96RD7 426 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 CHID1Q9BWS9 393 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 SOX17Q9H6I2 414 aaPredicted RBP11.09□□□□□ -0.63
CLK4-206ENST00000520878 RMND5AQ9H871 391 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 ZIM2Q9NZV7 527 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 RFXANKO14593 260 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 KIAA0355O15063 1070 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 KPNA5O15131 536 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 WISP3O95389 354 aaPredicted RBP11.09□□□□□ -0.63
CLK4-206ENST00000520878 PGRP06401 933 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 C8GP07360 202 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 TIMP2P16035 220 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 OXTRP30559 389 aa11.09□□□□□ -0.63
CLK4-206ENST00000520878 IRX1P78414 480 aaPredicted RBP11.09□□□□□ -0.63
CLK4-206ENST00000520878 FAM98BQ52LJ0 330 aaKnown RBP11.09□□□□□ -0.63
CLK4-206ENST00000520878 ZNF805Q5CZA5 627 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms