RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 EGFL8Q99944 293 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 PITPNM3Q9BZ71 974 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 IL21RQ9HBE5 538 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 PTBP2Q9UKA9 531 aaKnown RBP16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 TDRKHQ9Y2W6 561 aaKnown RBP16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 PI4KAP42356 2102 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 PRR33A8MZF0 331 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 IMPDH1P20839 514 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 CTSKP43235 329 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 OVGP1Q12889 678 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 FASTKQ14296 549 aaKnown RBP16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 FAM174AQ8TBP5 190 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 LRRC8CQ8TDW0 803 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 FERD3LQ96RJ6 166 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 HGH1Q9BTY7 390 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 GSTO2Q9H4Y5 243 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 RDH14Q9HBH5 336 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 NUDT4Q9NZJ9 180 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 TMEM131Q92545 1883 aa16.56■□□□□ 0.24
TSNARE1-205ENST00000520166 SPEGQ15772 3267 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 SYCE1LA8MT33 242 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 UBFD1O14562 309 aaKnown RBP16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 SLC16A5O15375 505 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 SLC16A8O95907 504 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 PLOD1Q02809 727 aaPredicted RBP16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 ILF3Q12906 894 aaKnown RBP eCLIP16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 STX3Q13277 289 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 LRP8Q14114 963 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 SYT12Q8IV01 421 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 PDPRQ8NCN5 879 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 PPP1R14CQ8TAE6 165 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 MCOLN3Q8TDD5 553 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 PRR11Q96HE9 360 aaPredicted RBP16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 SORT1Q99523 831 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 XKR8Q9H6D3 395 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 CCDC134Q9H6E4 229 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 ZBTB26Q9HCK0 441 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 ABCF3Q9NUQ8 709 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 PCDHGA2Q9Y5H1 932 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 TP53BP1Q12888 1972 aaPredicted RBP16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 ADAMTS9Q9P2N4 1935 aa16.55■□□□□ 0.24
TSNARE1-205ENST00000520166 YY2O15391 372 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 SHOX2O60902 331 aaPredicted RBP16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 SUPT7LO94864 414 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 CATP04040 527 aaKnown RBP16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 CFIP05156 583 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 VIMP08670 466 aaKnown RBP16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 CYP2A7P20853 494 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 CNR2P34972 360 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 SLC19A1P41440 591 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 SLC1A6P48664 564 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 ALDH18A1P54886 795 aaKnown RBP16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 DNAJB13P59910 316 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 HERVK_113P63132 956 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 SETDB1Q15047 1291 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 CGB2Q6NT52 195 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 ABRAXAS1Q6UWZ7 409 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 DCBLD1Q8N8Z6 715 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 FAM46DQ8NEK8 389 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 FOPNLQ96NB1 174 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 ERVK-6Q9BXR3 956 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 FAM107BQ9H098 131 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 FGFR1OP2Q9NVK5 253 aa16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 STOX2Q9P2F5 926 aaPredicted RBP16.54■□□□□ 0.24
TSNARE1-205ENST00000520166 IFRD1O00458 451 aaPredicted RBP16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 KCNJ13O60928 360 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 SNNO75324 88 aaPredicted RBP16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 SERPINE1P05121 402 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 MAP4P27816 1152 aaKnown RBP16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 IMPA1P29218 277 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 PRDX3P30048 256 aaKnown RBP16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 YBX1P67809 324 aaKnown RBP16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 NFKB2Q00653 900 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 SP140Q13342 867 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 DEFB133Q30KQ1 61 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 ARL13AQ5H913 290 aaPredicted RBP16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 TCEAL6Q6IPX3 200 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 IYDQ6PHW0 289 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 C11orf74Q86VG3 221 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 NAGSQ8N159 534 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 SLC25A45Q8N413 288 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 ZNF548Q8NEK5 533 aaPredicted RBP16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 OR5K2Q8NHB8 316 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 AGR3Q8TD06 166 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 ZNF480Q8WV37 535 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 TCEAL3Q969E4 200 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 L3HYPDHQ96EM0 354 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 LRFN3Q9BTN0 628 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 MENTQ9BUN1 341 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 GSDMCQ9BYG8 508 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 PCOLCE2Q9UKZ9 415 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 CACNA1EQ15878 2313 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 B4DGG1 531 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 E2F3O00716 465 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 ANXA5P08758 320 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 HIST1H2AGP0C0S8 130 aaPredicted RBP16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 MTHFD1P11586 935 aaKnown RBP16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 MYF5P13349 255 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 F3P13726 295 aa16.53■□□□□ 0.24
TSNARE1-205ENST00000520166 GNSP15586 552 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms