RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 CRTC3Q6UUV7 619 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 OVCH1Q7RTY7 1134 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 BNIPLQ7Z465 357 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 GALNTL5Q7Z4T8 443 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 WDR53Q7Z5U6 358 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 EID3Q8N140 333 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 FBXL13Q8NEE6 735 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 OR10Q1Q8NGQ4 319 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 CCDC110Q8TBZ0 833 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 SLC22A8Q8TCC7 542 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 STK32AQ8WU08 396 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 CASKIN2Q8WXE0 1202 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 PIGTQ969N2 578 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 MED15Q96RN5 788 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 C17orf62Q9BQA9 187 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 TRIM62Q9BVG3 475 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 AP1M1Q9BXS5 423 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 SLC7A5P2Q9GIP4 190 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 TP63Q9H3D4 680 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 ATP13A3Q9H7F0 1226 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 FAM207AQ9NSI2 230 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 KBTBD4Q9NVX7 518 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 ASNSD1Q9NWL6 643 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 SERTAD3Q9UJW9 196 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 POMT2Q9UKY4 750 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 DOCK4Q8N1I0 1966 aa6.44□□□□□ -1.38
CTNNA1-216ENST00000519489 SHOX2O60902 331 aaPredicted RBP6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 HSF2BPO75031 334 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 ONECUT2O95948 504 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 GLI1P08151 1106 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 CTPS1P17812 591 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 POLR2CP19387 275 aaPredicted RBP6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 RFC3P40938 356 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 STAT6P42226 847 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 CSNK1DP48730 415 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 EFNA3P52797 238 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 BCL2L1Q07817 233 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 STK4Q13043 487 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 PDCLQ13371 301 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 RPE65Q16518 533 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 SLC25A35Q3KQZ1 300 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 KHDC1Q4VXA5 237 aaKnown RBP6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 CNNM4Q6P4Q7 775 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 POMZP3Q6PJE2 187 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 WASH2PQ6VEQ5 465 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 ACAD11Q709F0 780 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 STRADAQ7RTN6 431 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 DAAM2Q86T65 1068 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 FAM131BQ86XD5 332 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 RBM12BQ8IXT5 1001 aaKnown RBP6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 SMYD4Q8IYR2 804 aaPredicted RBP6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 BEST3Q8N1M1 668 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 ZNF655Q8N720 491 aaPredicted RBP6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 PDILTQ8N807 584 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 CCDC150Q8NCX0 1101 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 EXD1Q8NHP7 514 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 SUN3Q8TAQ9 357 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 PROKR1Q8TCW9 393 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 ZFPM2Q8WW38 1151 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 CXorf40BQ96DE9 158 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 ZMYND19Q96E35 227 aaPredicted RBP6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 MCCC1Q96RQ3 725 aaPredicted RBP6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 PIGQQ9BRB3 760 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 BEX2Q9BXY8 128 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 OR2AG1Q9H205 316 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 BLZF1Q9H2G9 400 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 CUEDC2Q9H467 287 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 ESRP2Q9H6T0 727 aaKnown RBP6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 FANCEQ9HB96 536 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 PNPLA3Q9NST1 481 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 TRMT1Q9NXH9 659 aaKnown RBP6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 CCDC39Q9UFE4 941 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 HPCAL4Q9UM19 191 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 LIMCH1Q9UPQ0 1083 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 PCDHB4Q9Y5E5 795 aa6.43□□□□□ -1.38
CTNNA1-216ENST00000519489 VSTM2BA6NLU5 285 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 WASH4PA8MWX3 477 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 PSMD11O00231 422 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 CHUKO15111 745 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 NEURL1O76050 574 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 PDE9AO76083 593 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 LRIG2O94898 1065 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 GHRHP01286 108 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 TP53P04637 393 aaPredicted RBP6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 HBQ1P09105 142 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 ACPPP15309 386 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 ZNF24P17028 368 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 ZNF7P17097 686 aaPredicted RBP6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 TFEBP19484 476 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 SULT1E1P49888 294 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 MXI1P50539 228 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 EEF1A2Q05639 463 aaKnown RBP6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 DEUP1Q05D60 604 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 ZNF33BQ06732 778 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 TRAF2Q12933 501 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 MESDQ14696 234 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 GRM3Q14832 879 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 OR1C1Q15619 314 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 GXYLT1Q4G148 440 aa6.42□□□□□ -1.38
CTNNA1-216ENST00000519489 TFDP3Q5H9I0 405 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms