RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 WIPI2Q9Y4P8 454 aa1.1□□□□□ -2.23
RNU6-561P-201ENST00000516222 STYXL1Q9Y6J8 313 aa1.1□□□□□ -2.23
RNU6-561P-201ENST00000516222 IGHV4-30-2A0A087WSY4 118 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 H3BQ06 376 aaPredicted RBP1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 SLC33A1O00400 549 aaPredicted RBP1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 GLRA3O75311 464 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 LRCH4O75427 683 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 CDK2AP2O75956 126 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 SEC24AO95486 1093 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 ZNF853P0CG23 659 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 ACTN1P12814 892 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 MSH2P43246 934 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 CX3CL1P78423 397 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 GOLGA8DPQ0D2H9 430 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 EFTUD2Q15029 972 aaKnown RBP eCLIP1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 KLHL26Q53HC5 615 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 HSP90AB2PQ58FF8 381 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 ANO1Q5XXA6 986 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 CDC73Q6P1J9 531 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 LINGO4Q6UY18 593 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 BTN2A1Q7KYR7 527 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 TIPARPQ7Z3E1 657 aaKnown RBP1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 IQCHQ86VS3 1027 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 CATSPER3Q86XQ3 398 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 C11orf42Q8N5U0 333 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 CCDC185Q8N715 623 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 OR5T2Q8NGG2 359 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 C9orf43Q8TAL5 461 aaPredicted RBP1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 RNF128Q8TEB7 428 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 PHLDA1Q8WV24 401 aaPredicted RBP1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 FAM149B1Q96BN6 582 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 CEP295NLQ96MC4 621 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 ZNF285Q96NJ3 590 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 CTRCQ99895 268 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 LBHD1Q9BQE6 289 aaPredicted RBP1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 URM1Q9BTM9 101 aaKnown RBP1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 NUP85Q9BW27 656 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 RBM24Q9BX46 236 aaKnown RBP1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 HOXD1Q9GZZ0 328 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 MIS12Q9H081 205 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 ADNPQ9H2P0 1102 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 JPT2Q9H910 190 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 HHATLQ9HCP6 504 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 KCNMB3Q9NPA1 279 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 A4GALTQ9NPC4 353 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 MTMR10Q9NXD2 777 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 CNOT8Q9UFF9 292 aaKnown RBP1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 C19orf25Q9UFG5 118 aaPredicted RBP1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 SARDHQ9UL12 918 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 PNMA2Q9UL42 364 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 TNNQ9UQP3 1299 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 NAALAD2Q9Y3Q0 740 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 RIPOR2Q9Y4F9 1068 aa1.09□□□□□ -2.23
RNU6-561P-201ENST00000516222 HCFC1P51610 2035 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 IGLV4-3A0A075B6K6 122 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 A0A1W2PR80 420 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 H0YAE9 185 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 NDUFS4O43181 175 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 PHF1O43189 567 aaPredicted RBP1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 IGHV4-31P0DP07 118 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 ANPEPP15144 967 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 SERPINB3P29508 390 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 RGRP47804 291 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 F2RL1P55085 397 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 MAZP56270 477 aaKnown RBP1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 RIPK4P57078 832 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 HNRNPKP61978 463 aaKnown RBP eCLIP1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 SNRPEP62304 92 aaKnown RBP1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 IGLV3-21P80748 117 aaPredicted RBP1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 OS9Q13438 667 aaPredicted RBP1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 FRG1Q14331 258 aaKnown RBP1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 TNIP1Q15025 636 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 MARC1Q5VT66 337 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 ZCCHC12Q6PEW1 402 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 TMEM207Q6UWW9 146 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 SEPT14Q6ZU15 432 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 CEP97Q8IW35 865 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 ARHGAP12Q8IWW6 846 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 MAML2Q8IZL2 1156 aaPredicted RBP1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 CDK20Q8IZL9 346 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 ENAHQ8N8S7 591 aaPredicted RBP1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 NFAM1Q8NET5 270 aaPredicted RBP1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 EGLN2Q96KS0 407 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 UBXN10Q96LJ8 280 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 FAM81BQ96LP2 452 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 C10orf90Q96M02 699 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 GFI1Q99684 422 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 EBF4Q9BQW3 602 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 PANK2Q9BZ23 570 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 GPR63Q9BZJ6 419 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 MTHFD2LQ9H903 347 aaPredicted RBP1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 RIC8AQ9NPQ8 531 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 SPHK1Q9NYA1 384 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 WSB2Q9NYS7 404 aaPredicted RBP1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 NPAP1Q9NZP6 1156 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 CACNG4Q9UBN1 327 aa1.08□□□□□ -2.24
RNU6-561P-201ENST00000516222 A0A1W2PQM1 296 aa1.07□□□□□ -2.24
RNU6-561P-201ENST00000516222 FAM168BA1KXE4 195 aa1.07□□□□□ -2.24
RNU6-561P-201ENST00000516222 E9PAM4 449 aa1.07□□□□□ -2.24
RNU6-561P-201ENST00000516222 GAPDHSO14556 408 aaPredicted RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms