RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 MEX3BQ6ZN04 569 aaKnown RBP10.09□□□□□ -0.79
CLDND1-231ENST00000515620 ZNF571Q7Z3V5 609 aaPredicted RBP10.09□□□□□ -0.79
CLDND1-231ENST00000515620 AMIGO1Q86WK6 493 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 FAM20CQ8IXL6 584 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 CFAP206Q8IYR0 622 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 NIPA2Q8N8Q9 360 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 KCTD6Q8NC69 237 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLDND1-231ENST00000515620 TADA1Q96BN2 335 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 ZNF670Q9BS34 389 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 CCM2Q9BSQ5 444 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 WDR54Q9H977 334 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 ZNF160Q9HCG1 818 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 SEMA3GQ9NS98 782 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 SMOXQ9NWM0 555 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 PTGFRNQ9P2B2 879 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 CTSFQ9UBX1 484 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 PCDHGB6Q9Y5F9 930 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 CACNA1CQ13936 2221 aa10.09□□□□□ -0.79
CLDND1-231ENST00000515620 C17orf113A0A1B0GUU1 675 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 A0A1B0GX78 115 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 DDX3XO00571 662 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLDND1-231ENST00000515620 RASAL1O95294 804 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 UQCRHP07919 91 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 PYGMP11217 842 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 GZMAP12544 262 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 PPIDQ08752 370 aaKnown RBP10.08□□□□□ -0.8
CLDND1-231ENST00000515620 AP1B1Q10567 949 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 PRKG2Q13237 762 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 NKG7Q16617 165 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 TTLL10Q6ZVT0 673 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 NCCRP1Q6ZVX7 275 aaPredicted RBP10.08□□□□□ -0.8
CLDND1-231ENST00000515620 COX15Q7KZN9 410 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 OVCH1Q7RTY7 1134 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 PQLC3Q8N755 202 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 PHC3Q8NDX5 983 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 CCDC110Q8TBZ0 833 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 HM13Q8TCT9 377 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 DTX3LQ8TDB6 740 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.08□□□□□ -0.8
CLDND1-231ENST00000515620 DLG3Q92796 817 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 VPS50Q96JG6 964 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 MAGED4Q96JG8 741 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 ERGIC2Q96RQ1 377 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLDND1-231ENST00000515620 SLC25A51Q9H1U9 297 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 TFB2MQ9H5Q4 396 aaKnown RBP10.08□□□□□ -0.8
CLDND1-231ENST00000515620 HAUS4Q9H6D7 363 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 UBP1Q9NZI7 540 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLDND1-231ENST00000515620 IL17CQ9P0M4 197 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 IP6K2Q9UHH9 426 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 ANAPC7Q9UJX3 599 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 ICKQ9UPZ9 632 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 PKP3Q9Y446 797 aa10.08□□□□□ -0.8
CLDND1-231ENST00000515620 NCOA6Q14686 2063 aaPredicted RBP10.08□□□□□ -0.8
CLDND1-231ENST00000515620 A0A0J9YY10 115 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 LRRC53A6NM62 1247 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 IFRD1O00458 451 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-231ENST00000515620 SGTAO43765 313 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 FAM155BO75949 473 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 WISP2O76076 250 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 USP1O94782 785 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 PRAMEF1O95521 474 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 HPP00738 406 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 ALBP02768 609 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 ACPPP15309 386 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 SOX11P35716 441 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 CHRNA4P43681 627 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 UBE2HP62256 183 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 PMP22Q01453 160 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 SLC14A2Q15849 920 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 HADHQ16836 314 aaKnown RBP10.07□□□□□ -0.8
CLDND1-231ENST00000515620 GLT6D1Q7Z4J2 308 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 CPNE8Q86YQ8 564 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 KBTBD2Q8IY47 623 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 SLC25A41Q8N5S1 370 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 METTL27Q8N6F8 245 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-231ENST00000515620 SIRT6Q8N6T7 355 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 DNAJB8Q8NHS0 232 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 ENOX1Q8TC92 643 aaKnown RBP10.07□□□□□ -0.8
CLDND1-231ENST00000515620 BLOC1S5Q8TDH9 187 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 BRIX1Q8TDN6 353 aaKnown RBP10.07□□□□□ -0.8
CLDND1-231ENST00000515620 ADAMTS18Q8TE60 1221 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 LINC00615Q96LM1 132 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-231ENST00000515620 OR2A14Q96R47 310 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 CRB3Q9BUF7 120 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 ENKD1Q9H0I2 346 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 TRABDQ9H4I3 376 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 MVB12BQ9H7P6 319 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 GPAMQ9HCL2 828 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 FANCLQ9NW38 375 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 NXT1Q9UKK6 140 aaKnown RBP10.07□□□□□ -0.8
CLDND1-231ENST00000515620 PLCL2Q9UPR0 1127 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 HEY1Q9Y5J3 304 aa10.07□□□□□ -0.8
CLDND1-231ENST00000515620 TMEM200CA6NKL6 621 aa10.06□□□□□ -0.8
CLDND1-231ENST00000515620 MAP2K7O14733 419 aa10.06□□□□□ -0.8
CLDND1-231ENST00000515620 PRR35P0CG20 571 aa10.06□□□□□ -0.8
CLDND1-231ENST00000515620 PIM1P11309 404 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms