RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 AADATQ8N5Z0 425 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 L3MBTL4Q8NA19 623 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 SLC26A7Q8TE54 656 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 LINC00615Q96LM1 132 aaPredicted RBP14.58□□□□□ -0.08
VCAN-211ENST00000513984 HBEGFQ99075 208 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 TACO1Q9BSH4 297 aaKnown RBP14.58□□□□□ -0.08
VCAN-211ENST00000513984 OR2AG1Q9H205 316 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 ACTR8Q9H981 624 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 DNAJC11Q9NVH1 559 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 MAP10Q9P2G4 905 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 FAM8A1Q9UBU6 413 aa14.58□□□□□ -0.08
VCAN-211ENST00000513984 KCNE1BA0A087WTH5 132 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 MID1O15344 667 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 VEGFDO43915 354 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 SLC22A3O75751 556 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 ADH1BP00325 375 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 CATP04040 527 aaKnown RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 MAP4P27816 1152 aaKnown RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 VHLP40337 213 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 KIR2DL1P43626 348 aaPredicted RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 GALK1P51570 392 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 PFN3P60673 137 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 UFM1P61960 85 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 ABRQ12979 859 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 AP5B1Q2VPB7 878 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 VPS26BQ4G0F5 336 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 NEK5Q6P3R8 708 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 ADAMTSL4Q6UY14 1074 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 TDHQ8IZJ6 230 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 NRG4Q8WWG1 115 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 ERLEC1Q96DZ1 483 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 SPDL1Q96EA4 605 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 TEX37Q96LM6 180 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 GPATCH1Q9BRR8 931 aaKnown RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 FARSBQ9NSD9 589 aaKnown RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 ADA2Q9NZK5 511 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 LMCD1Q9NZU5 365 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 TMEM181Q9P2C4 612 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 ATXN10Q9UBB4 475 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 EPS15L1Q9UBC2 864 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 SUCOQ9UBS9 1254 aaKnown RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 BCAP29Q9UHQ4 241 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 CROCCQ5TZA2 2017 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 C17orf113A0A1B0GUU1 675 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 A0A1W2PP18 115 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 FAM234BA2RU67 622 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 KRT87PA6NCN2 255 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 K7EQS6 105 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 RNASEH1O60930 286 aaKnown RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 BCAS2O75934 225 aaPredicted RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 KRT6AP02538 564 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 KRT6BP04259 564 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 C5AR1P21730 350 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 PBLDP30039 288 aaPredicted RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 BMP8BP34820 402 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 WASP42768 502 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 KRT6CP48668 564 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 CCR3P51677 355 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 KCNK10P57789 538 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 TAS2R38P59533 333 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 MAD2L1Q13257 205 aaPredicted RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 HTR4Q13639 388 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 GTF2H3Q13889 308 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 FLOT2Q14254 428 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 C2orf27AQ580R0 203 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 PRMT9Q6P2P2 845 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 XKR5Q6UX68 686 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 TRAPPC5Q8IUR0 188 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 FBXO15Q8NCQ5 510 aaPredicted RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 PROKR1Q8TCW9 393 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 PYDC1Q8WXC3 89 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 ATL1Q8WXF7 558 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 EZH1Q92800 747 aaPredicted RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 PYCR2Q96C36 320 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 ASB9Q96DX5 294 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 ABHD8Q96I13 439 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 COX14Q96I36 57 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 HIC2Q96JB3 615 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 MSLNLQ96KJ4 702 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 MAGEB10Q96LZ2 347 aaPredicted RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 CCDC138Q96M89 665 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 FOPNLQ96NB1 174 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 HOPXQ9BPY8 73 aaPredicted RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 CLDND1Q9NY35 253 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 ASIC5Q9NY37 505 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 CD300AQ9UGN4 299 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 ZNF490Q9ULM2 529 aaPredicted RBP14.57□□□□□ -0.08
VCAN-211ENST00000513984 GPR34Q9UPC5 381 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 SLC22A14Q9Y267 594 aa14.57□□□□□ -0.08
VCAN-211ENST00000513984 DYTNA2CJ06 578 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 C9JVG2 144 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 H3BM21 787 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 FXYD1O00168 92 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 ACOT8O14734 319 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 ANKRD28O15084 1053 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 EEDO75530 441 aaKnown RBP14.56□□□□□ -0.08
VCAN-211ENST00000513984 PDHA2P29803 388 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 LTBRP36941 435 aa14.56□□□□□ -0.08
VCAN-211ENST00000513984 POLR2JP52435 117 aaKnown RBP14.56□□□□□ -0.08
VCAN-211ENST00000513984 MS4A2Q01362 244 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms