RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 SLC25A11Q02978 314 aaKnown RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 CCDC173Q0VFZ6 552 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 TRAF2Q12933 501 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 UGP2Q16851 508 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 LONRF1Q17RB8 773 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 TMEM52BQ4KMG9 183 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 TDRD12Q587J7 1177 aaKnown RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 RFLNAQ6ZTI6 216 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 EFL1Q7Z2Z2 1120 aaKnown RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 RD3Q7Z3Z2 195 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 POLNQ7Z5Q5 900 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 DENND6BQ8NEG7 585 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 NLGN4YQ8NFZ3 816 aaPredicted RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 CCL4L1Q8NHW4 92 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 ZFP28Q8NHY6 868 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 OR1E3Q8WZA6 343 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 ECHDC3Q96DC8 303 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 NXPE2Q96DL1 559 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 ATXN7L3BQ96GX2 97 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 APIPQ96GX9 242 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 NAF1Q96HR8 494 aaKnown RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 VCPIP1Q96JH7 1222 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 CSPG4P5Q96PW8 444 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 ELAC2Q9BQ52 826 aaKnown RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 CPEB1Q9BZB8 566 aaKnown RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 NAT10Q9H0A0 1025 aaKnown RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 ISCUQ9H1K1 167 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 RETREG1Q9H6L5 497 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 SUDS3Q9H7L9 328 aaPredicted RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 FGF22Q9HCT0 170 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 MRPL40Q9NQ50 206 aaKnown RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 TMEM51Q9NW97 253 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 PIH1D1Q9NWS0 290 aaKnown RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 APOBEC3BQ9UH17 382 aaKnown RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 IPO11Q9UI26 975 aaKnown RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 SNRNP200O75643 2136 aaKnown RBP6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 SPTBP11277 2137 aa6.35□□□□□ -1.39
HMGN1P17-201ENST00000513734 CCDC88CQ9P219 2028 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 TMEM202A6NGA9 273 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 NPIPB15A6NHN6 443 aaPredicted RBP6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 SMTNL1A8MU46 457 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 YY2O15391 372 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 FOXS1O43638 330 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 PRICKLE3O43900 615 aaPredicted RBP6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 MFAP3LO75121 409 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 USP12O75317 370 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 SLC43A1O75387 559 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 RECQL5O94762 991 aaPredicted RBP6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 IPO13O94829 963 aaKnown RBP6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 GZMAP12544 262 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 HK1P19367 917 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 LHCGRP22888 699 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 IL4RP24394 825 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 ARSEP51690 589 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 THOP1P52888 689 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 SOX8P57073 446 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 TAS2R40P59535 323 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 HNRNPKP61978 463 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 CCDC15Q0P6D6 951 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 ILKQ13418 452 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 NFATC4Q14934 902 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 DPYSL2Q16555 572 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 C3orf38Q5JPI3 329 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 FAXCQ5TGI0 409 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 DENND2CQ68D51 928 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 MACC1Q6ZN28 852 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 TSPAN33Q86UF1 283 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 KRT78Q8N1N4 520 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 MAPK15Q8TD08 544 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 ASB12Q8WXK4 309 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 PRR11Q96HE9 360 aaPredicted RBP6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 APOOQ9BUR5 198 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 NUP85Q9BW27 656 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 CINPQ9BW66 212 aaPredicted RBP6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 SYNDIG1Q9H7V2 258 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 NOD2Q9HC29 1040 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 ASCL3Q9NQ33 180 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 JKAMPQ9P055 326 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 IFNKQ9P0W0 207 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 ANAPC7Q9UJX3 599 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 SATB2Q9UPW6 733 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 COMMD10Q9Y6G5 202 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 SLC30A1Q9Y6M5 507 aa6.34□□□□□ -1.39
HMGN1P17-201ENST00000513734 EME2A4GXA9 379 aaPredicted RBP6.33□□□□□ -1.4
HMGN1P17-201ENST00000513734 PRSS29PA6NIE9 313 aa6.33□□□□□ -1.4
HMGN1P17-201ENST00000513734 TMEM110-MUSTN1A8MSY1 372 aa6.33□□□□□ -1.4
HMGN1P17-201ENST00000513734 RHPN2P1A8MT19 583 aa6.33□□□□□ -1.4
HMGN1P17-201ENST00000513734 LMO7DNF2Z398 122 aa6.33□□□□□ -1.4
HMGN1P17-201ENST00000513734 GPR42O15529 346 aa6.33□□□□□ -1.4
HMGN1P17-201ENST00000513734 RNF8O76064 485 aa6.33□□□□□ -1.4
HMGN1P17-201ENST00000513734 HAUS5O94927 633 aa6.33□□□□□ -1.4
HMGN1P17-201ENST00000513734 MATN4O95460 622 aa6.33□□□□□ -1.4
HMGN1P17-201ENST00000513734 CYP1A2P05177 515 aa6.33□□□□□ -1.4
HMGN1P17-201ENST00000513734 PDHA1P08559 390 aa6.33□□□□□ -1.4
HMGN1P17-201ENST00000513734 ALPIP09923 528 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms