RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLDND1-227ENST00000513452 TADA1Q96BN2 335 aa10.09□□□□□ -0.79
CLDND1-227ENST00000513452 ZNF670Q9BS34 389 aa10.09□□□□□ -0.79
CLDND1-227ENST00000513452 CCM2Q9BSQ5 444 aa10.09□□□□□ -0.79
CLDND1-227ENST00000513452 WDR54Q9H977 334 aa10.09□□□□□ -0.79
CLDND1-227ENST00000513452 ZNF160Q9HCG1 818 aa10.09□□□□□ -0.79
CLDND1-227ENST00000513452 SEMA3GQ9NS98 782 aa10.09□□□□□ -0.79
CLDND1-227ENST00000513452 SMOXQ9NWM0 555 aa10.09□□□□□ -0.79
CLDND1-227ENST00000513452 PTGFRNQ9P2B2 879 aa10.09□□□□□ -0.79
CLDND1-227ENST00000513452 CTSFQ9UBX1 484 aa10.09□□□□□ -0.79
CLDND1-227ENST00000513452 PCDHGB6Q9Y5F9 930 aa10.09□□□□□ -0.79
CLDND1-227ENST00000513452 CACNA1CQ13936 2221 aa10.09□□□□□ -0.79
CLDND1-227ENST00000513452 C17orf113A0A1B0GUU1 675 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 A0A1B0GX78 115 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 DDX3XO00571 662 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLDND1-227ENST00000513452 RASAL1O95294 804 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 UQCRHP07919 91 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 PYGMP11217 842 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 GZMAP12544 262 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 PPIDQ08752 370 aaKnown RBP10.08□□□□□ -0.8
CLDND1-227ENST00000513452 AP1B1Q10567 949 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 PRKG2Q13237 762 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 NKG7Q16617 165 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 TTLL10Q6ZVT0 673 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 NCCRP1Q6ZVX7 275 aaPredicted RBP10.08□□□□□ -0.8
CLDND1-227ENST00000513452 COX15Q7KZN9 410 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 OVCH1Q7RTY7 1134 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 PQLC3Q8N755 202 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 PHC3Q8NDX5 983 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 CCDC110Q8TBZ0 833 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 HM13Q8TCT9 377 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 DTX3LQ8TDB6 740 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.08□□□□□ -0.8
CLDND1-227ENST00000513452 DLG3Q92796 817 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 VPS50Q96JG6 964 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 MAGED4Q96JG8 741 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 ERGIC2Q96RQ1 377 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLDND1-227ENST00000513452 SLC25A51Q9H1U9 297 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 TFB2MQ9H5Q4 396 aaKnown RBP10.08□□□□□ -0.8
CLDND1-227ENST00000513452 HAUS4Q9H6D7 363 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 UBP1Q9NZI7 540 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.08□□□□□ -0.85e-8■■■■□ 25.7
CLDND1-227ENST00000513452 IL17CQ9P0M4 197 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 IP6K2Q9UHH9 426 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 ANAPC7Q9UJX3 599 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 ICKQ9UPZ9 632 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 PKP3Q9Y446 797 aa10.08□□□□□ -0.8
CLDND1-227ENST00000513452 NCOA6Q14686 2063 aaPredicted RBP10.08□□□□□ -0.8
CLDND1-227ENST00000513452 A0A0J9YY10 115 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 LRRC53A6NM62 1247 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 IFRD1O00458 451 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-227ENST00000513452 SGTAO43765 313 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 FAM155BO75949 473 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 WISP2O76076 250 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 USP1O94782 785 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 PRAMEF1O95521 474 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 HPP00738 406 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 ALBP02768 609 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 ACPPP15309 386 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 SOX11P35716 441 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 CHRNA4P43681 627 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 UBE2HP62256 183 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 PMP22Q01453 160 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 SLC14A2Q15849 920 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 HADHQ16836 314 aaKnown RBP10.07□□□□□ -0.8
CLDND1-227ENST00000513452 GLT6D1Q7Z4J2 308 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 CPNE8Q86YQ8 564 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 KBTBD2Q8IY47 623 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 SLC25A41Q8N5S1 370 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 METTL27Q8N6F8 245 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-227ENST00000513452 SIRT6Q8N6T7 355 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 DNAJB8Q8NHS0 232 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 ENOX1Q8TC92 643 aaKnown RBP10.07□□□□□ -0.8
CLDND1-227ENST00000513452 BLOC1S5Q8TDH9 187 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 BRIX1Q8TDN6 353 aaKnown RBP10.07□□□□□ -0.8
CLDND1-227ENST00000513452 ADAMTS18Q8TE60 1221 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 LINC00615Q96LM1 132 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-227ENST00000513452 OR2A14Q96R47 310 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 CRB3Q9BUF7 120 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 ENKD1Q9H0I2 346 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 TRABDQ9H4I3 376 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 MVB12BQ9H7P6 319 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 GPAMQ9HCL2 828 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 FANCLQ9NW38 375 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 NXT1Q9UKK6 140 aaKnown RBP10.07□□□□□ -0.8
CLDND1-227ENST00000513452 PLCL2Q9UPR0 1127 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 HEY1Q9Y5J3 304 aa10.07□□□□□ -0.8
CLDND1-227ENST00000513452 TMEM200CA6NKL6 621 aa10.06□□□□□ -0.8
CLDND1-227ENST00000513452 MAP2K7O14733 419 aa10.06□□□□□ -0.8
CLDND1-227ENST00000513452 PRR35P0CG20 571 aa10.06□□□□□ -0.8
CLDND1-227ENST00000513452 PIM1P11309 404 aaPredicted RBP10.06□□□□□ -0.8
CLDND1-227ENST00000513452 KLK2P20151 261 aa10.06□□□□□ -0.8
CLDND1-227ENST00000513452 GCGRP47871 477 aa10.06□□□□□ -0.8
CLDND1-227ENST00000513452 PRLHRP49683 370 aa10.06□□□□□ -0.8
CLDND1-227ENST00000513452 PTPRCAPQ14761 206 aa10.06□□□□□ -0.8
CLDND1-227ENST00000513452 PDK2Q15119 407 aa10.06□□□□□ -0.8
CLDND1-227ENST00000513452 SLC5A12Q1EHB4 618 aa10.06□□□□□ -0.8
CLDND1-227ENST00000513452 SIRPB2Q5JXA9 342 aa10.06□□□□□ -0.8
CLDND1-227ENST00000513452 E4F1Q66K89 784 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms