RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 IRGMA1A4Y4 181 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 C12orf71A8MTZ7 269 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 PGRMC2O15173 223 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 C22orf31O95567 290 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 MT-CYBP00156 380 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-211ENST00000513346 HPRP00739 348 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 SMIM18P0DKX4 95 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 IL7P13232 177 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 DNAJA1P31689 397 aaKnown RBP11.05□□□□□ -0.64
TCOF1-211ENST00000513346 ATXN1P54253 815 aaKnown RBP11.05□□□□□ -0.64
TCOF1-211ENST00000513346 ANKDD1AQ495B1 522 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 SLC39A4Q6P5W5 647 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 SLC15A3Q8IY34 581 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 TMEM192Q8IY95 271 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 CMTR2Q8IYT2 770 aaKnown RBP11.05□□□□□ -0.64
TCOF1-211ENST00000513346 LILRB4Q8NHJ6 448 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 TSPEARQ8WU66 669 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 SLC38A2Q96QD8 506 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 MFSD1Q9H3U5 465 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 ATP13A3Q9H7F0 1226 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 KLHL28Q9NXS3 571 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 AHSPQ9NZD4 102 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 CCNYL3P0C7X3 344 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 PLA2G16P53816 162 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 GMFBP60983 142 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 E2F2Q14209 437 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 NDUFAF6Q330K2 333 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 FAM174BQ3ZCQ3 159 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 RBM23Q86U06 439 aaKnown RBP11.05□□□□□ -0.64
TCOF1-211ENST00000513346 TBC1D15Q8TC07 691 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 ZNF490Q9ULM2 529 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-211ENST00000513346 Q9Y3F1 56 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 PCDHB3Q9Y5E6 796 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 STRCQ7RTU9 1775 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 ARHGEF33A8MVX0 844 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 ERN1O75460 977 aaKnown RBP11.05□□□□□ -0.64
TCOF1-211ENST00000513346 PRKACGP22612 351 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 SLC6A2P23975 617 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 AQP1P29972 269 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 SNAPC1Q16533 368 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 OTOP2Q7RTS6 562 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 AMIGO1Q86WK6 493 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 CCDC36Q8IYA8 594 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 IZUMO1Q8IYV9 350 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 MEIOBQ8N635 442 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 MFSD2AQ8NA29 543 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 OR13J1Q8NGT2 312 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 ATL1Q8WXF7 558 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 SLC38A4Q969I6 547 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 C11orf24Q96F05 449 aaPredicted RBP11.05□□□□□ -0.64
TCOF1-211ENST00000513346 TTYH2Q9BSA4 534 aa11.05□□□□□ -0.64
TCOF1-211ENST00000513346 SLC7A4O43246 635 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 SERPINB7O75635 380 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 RPP40O75818 363 aaKnown RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 CATP04040 527 aaKnown RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 TYMPP19971 482 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 MYL9P24844 172 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 CDH5P33151 784 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 CLCNKBP51801 687 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 PUDPQ08623 228 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 HSPA14Q0VDF9 509 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 PPP1R3AQ16821 1122 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 OR2T5Q6IEZ7 315 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 MTSS1LQ765P7 747 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 UBE2Q1Q7Z7E8 422 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 ZNF614Q8N883 585 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 FBXO22Q8NEZ5 403 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 OR2T29Q8NH02 315 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 DNAJB8Q8NHS0 232 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 TBATAQ96M53 351 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 TEFMQ96QE5 360 aaKnown RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 C1orf109Q9NX04 203 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 NKIRAS2Q9NYR9 191 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 COL16A1Q07092 1604 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 SH3BGRLO75368 114 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 PAGE1O75459 146 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 NPPAP01160 153 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 PKMP14618 531 aaKnown RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 PTX3P26022 381 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 DCKP27707 260 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 LBX1P52954 281 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 LAPTM5Q13571 262 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 PLPP4Q5VZY2 271 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 FAM92BQ6ZTR7 304 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 CARM1Q86X55 608 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 MINDY1Q8N5J2 469 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 ERMAPQ96PL5 475 aaPredicted RBP11.04□□□□□ -0.64
TCOF1-211ENST00000513346 PEBP4Q96S96 227 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 HBEGFQ99075 208 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 ZSCAN5AQ9BUG6 496 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 TXNRD2Q9NNW7 524 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 UCKL1Q9NWZ5 548 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 PCDHGA7Q9Y5G6 932 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 DOT1LQ8TEK3 1739 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 C9IYK1 514 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 PRAMEF1O95521 474 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 RPN2P04844 631 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 LILRA4P59901 499 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 GSTM4Q03013 218 aa11.04□□□□□ -0.64
TCOF1-211ENST00000513346 ZNF267Q14586 743 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms