RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 PRLHRP49683 370 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 PDK1Q15118 436 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 SLC1A5Q15758 541 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 RPUSD3Q6P087 351 aaKnown RBP18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 SPNS3Q6ZMD2 512 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 SHISA6Q6ZSJ9 500 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 DNAJC22Q8N4W6 341 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 OR1N1Q8NGS0 311 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 COG1Q8WTW3 980 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 NAP1L5Q96NT1 182 aaPredicted RBP18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 CCM2Q9BSQ5 444 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 LHPPQ9H008 270 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 COG4Q9H9E3 785 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 FKBPLQ9UIM3 349 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 CDC23Q9UJX2 597 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 NENFQ9UMX5 172 aa18.3■□□□□ 0.52
HMGCS1-206ENST00000511774 LRRD1A4D1F6 860 aa18.29■□□□□ 0.52
HMGCS1-206ENST00000511774 MAP3K7O43318 606 aa18.29■□□□□ 0.52
HMGCS1-206ENST00000511774 XIAPP98170 497 aa18.29■□□□□ 0.52
HMGCS1-206ENST00000511774 BOP1Q14137 746 aaKnown RBP18.29■□□□□ 0.52
HMGCS1-206ENST00000511774 FAM20CQ8IXL6 584 aa18.29■□□□□ 0.52
HMGCS1-206ENST00000511774 ZNF808Q8N4W9 903 aaPredicted RBP18.29■□□□□ 0.52
HMGCS1-206ENST00000511774 NR4A3Q92570 626 aa18.29■□□□□ 0.52
HMGCS1-206ENST00000511774 N4BP2L2Q92802 583 aaPredicted RBP18.29■□□□□ 0.52
HMGCS1-206ENST00000511774 THOC3Q96J01 351 aaKnown RBP18.29■□□□□ 0.52
HMGCS1-206ENST00000511774 TXLNGQ9NUQ3 528 aa18.29■□□□□ 0.52
HMGCS1-206ENST00000511774 SAE1Q9UBE0 346 aaPredicted RBP18.29■□□□□ 0.52
HMGCS1-206ENST00000511774 PKP3Q9Y446 797 aa18.29■□□□□ 0.52
HMGCS1-206ENST00000511774 TRGV8A0A0C4DH27 118 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 KLHL33A6NCF5 533 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 APOL1O14791 398 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 PRICKLE3O43900 615 aaPredicted RBP18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 EPOP01588 193 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 CD63P08962 238 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 MST1P26927 711 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 PEBP1P30086 187 aaKnown RBP18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 ADORA2A-AS1P86434 159 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 MFAP5Q13361 173 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 NKG7Q16617 165 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 FCRL6Q6DN72 434 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 SARM1Q6SZW1 724 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 UNC5AQ6ZN44 842 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 DTWD1Q8N5C7 304 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 OR11G2Q8NGC1 345 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 MAGEB10Q96LZ2 347 aaPredicted RBP18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 CHRNA10Q9GZZ6 450 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 FAM96AQ9H5X1 160 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 EPS8L2Q9H6S3 715 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 ASB8Q9H765 288 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 CHST11Q9NPF2 352 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 ANO10Q9NW15 660 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 PLA2G3Q9NZ20 509 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 HACD3Q9P035 362 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 ACANP16112 2415 aa18.28■□□□□ 0.52
HMGCS1-206ENST00000511774 CPAMD8Q8IZJ3 1885 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 AGAP14A8MT82 685 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 CCL21O00585 134 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 PPP1R12AO14974 1030 aaPredicted RBP18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 STX7O15400 261 aaKnown RBP18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 SRP72O76094 671 aaKnown RBP18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 PYGMP11217 842 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 DYNLT1P63172 113 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 TLDC1Q6P9B6 456 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 ISLR2Q6UXK2 745 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 GFRALQ6UXV0 394 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 OVCH1Q7RTY7 1134 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 AMER2Q8N7J2 671 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 IPMKQ8NFU5 416 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 OR4K2Q8NGD2 314 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 OR5AR1Q8NGP9 310 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 PACSIN1Q9BY11 444 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 SOX17Q9H6I2 414 aaPredicted RBP18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 MVB12BQ9H7P6 319 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 LMBRD1Q9NUN5 540 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 CTSFQ9UBX1 484 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 SH3BGRL2Q9UJC5 107 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 KLHL20Q9Y2M5 609 aa18.27■□□□□ 0.52
HMGCS1-206ENST00000511774 ZNF487B1APH4 448 aa18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 ONECUT2O95948 504 aa18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 CHRM5P08912 532 aaPredicted RBP18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 ALAS2P22557 587 aa18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 KIR3DL1P43629 444 aa18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 OLIG2Q13516 323 aa18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 STX1AQ16623 288 aa18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 TUBB8Q3ZCM7 444 aa18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 ALKBH5Q6P6C2 394 aaKnown RBP18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 TTLL10Q6ZVT0 673 aa18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 TFGQ92734 400 aaPredicted RBP18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.26■□□□□ 0.512e-6■■■■■ 30.1
HMGCS1-206ENST00000511774 FKBP10Q96AY3 582 aa18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 NACC2Q96BF6 587 aa18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 GORASP1Q9BQQ3 440 aa18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 CTTNBP2NLQ9P2B4 639 aa18.26■□□□□ 0.51
HMGCS1-206ENST00000511774 A0A0J9YY10 115 aa18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 C17orf113A0A1B0GUU1 675 aa18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 UNC5CO95185 931 aa18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 AGTP01019 485 aa18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 PECAM1P16284 738 aaPredicted RBP18.25■□□□□ 0.51
HMGCS1-206ENST00000511774 MCM3P25205 808 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms