RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 RPS2P15880 293 aaKnown RBP3.71□□□□□ -1.81
CAST-229ENST00000510098 CASTP20810 708 aaKnown RBP3.71□□□□□ -1.81
CAST-229ENST00000510098 CCR10P46092 362 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 GPC3P51654 580 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 BMXP51813 675 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 STARD6P59095 220 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 SIRPAP78324 504 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 ARF5P84085 180 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 LRRC74AQ0VAA2 488 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 GRAPQ13588 217 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 RCN2Q14257 317 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 LASP1Q14847 261 aaKnown RBP3.71□□□□□ -1.81
CAST-229ENST00000510098 MEP1BQ16820 701 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 HYAL4Q2M3T9 481 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 WSCD2Q2TBF2 565 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 ALS2CLQ60I27 953 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 Q6ZTC4 211 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 LDB1Q86U70 411 aaPredicted RBP3.71□□□□□ -1.81
CAST-229ENST00000510098 EXOC3L1Q86VI1 746 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 TBC1D21Q8IYX1 336 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 SIX6OS1Q8N1H7 587 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 MUC20Q8N307 709 aaPredicted RBP3.71□□□□□ -1.81
CAST-229ENST00000510098 FBXO39Q8N4B4 442 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 GBGT1Q8N5D6 347 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 OR52I2Q8NH67 350 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 FBXO30Q8TB52 745 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 LNX1Q8TBB1 728 aaPredicted RBP3.71□□□□□ -1.81
CAST-229ENST00000510098 ZNF606Q8WXB4 792 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 LPGAT1Q92604 370 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 ZNF622Q969S3 477 aaKnown RBP eCLIP3.71□□□□□ -1.811e-7■■□□□ 14.4
CAST-229ENST00000510098 SYAP1Q96A49 352 aaPredicted RBP3.71□□□□□ -1.81
CAST-229ENST00000510098 PTERQ96BW5 349 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 TRIM44Q96DX7 344 aaPredicted RBP3.71□□□□□ -1.81
CAST-229ENST00000510098 RBM18Q96H35 190 aaKnown RBP3.71□□□□□ -1.81
CAST-229ENST00000510098 PDLIM5Q96HC4 596 aaKnown RBP3.71□□□□□ -1.81
CAST-229ENST00000510098 OXNAD1Q96HP4 312 aaPredicted RBP3.71□□□□□ -1.81
CAST-229ENST00000510098 FERMT1Q9BQL6 677 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 MLPHQ9BV36 600 aaPredicted RBP3.71□□□□□ -1.81
CAST-229ENST00000510098 MMP27Q9H306 513 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 ABCB8Q9NUT2 735 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 KLHL9Q9P2J3 617 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 TRIM17Q9Y577 477 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 AP1M2Q9Y6Q5 423 aa3.71□□□□□ -1.81
CAST-229ENST00000510098 DOCK7Q96N67 2140 aa3.71□□□□□ -1.82
CAST-229ENST00000510098 GPR75-ASB3A0A0A6YYF3 556 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 RNF103-CHMP3A0A140T963 221 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 ZCWPW2A0A1B0GU75 182 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 A0A1B0GUV1 79 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 A0A1W2PRV1 198 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 OR6C76A6NM76 312 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 MAGEB17A8MXT2 336 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 RNF103O00237 685 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 KRT86O43790 486 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 DIAPH2O60879 1101 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 RTN2O75298 545 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 GCNT3O95395 438 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 CASP3P42574 277 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 TKTL1P51854 596 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 CAPZA1P52907 286 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 MLLT10P55197 1068 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 YBEYP58557 167 aaPredicted RBP3.7□□□□□ -1.82
CAST-229ENST00000510098 ERVFC1-1P60608 527 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 AKAP17AQ02040 695 aaKnown RBP3.7□□□□□ -1.82
CAST-229ENST00000510098 KLHL30Q0D2K2 578 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 HYAL1Q12794 435 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 GAGE2BQ13066 116 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 PLA2G7Q13093 441 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 ITGA7Q13683 1181 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 TUBB2AQ13885 445 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 KRT81Q14533 505 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 GAGE2EQ4V326 116 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 ZRANB3Q5FWF4 1079 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 C9orf50Q5SZB4 431 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 GAGE2AQ6NT46 116 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 FAM171BQ6P995 826 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 RBPMS2Q6ZRY4 209 aaKnown RBP3.7□□□□□ -1.82
CAST-229ENST00000510098 Q75L30 129 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 ADCK2Q7Z695 626 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 PEX5LQ8IYB4 626 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 SYCP3Q8IZU3 236 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 GUF1Q8N442 669 aaKnown RBP3.7□□□□□ -1.82
CAST-229ENST00000510098 HDDC3Q8N4P3 179 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 AFAP1Q8N556 730 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 XXYLT1Q8NBI6 393 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 ATAD1Q8NBU5 361 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 RDM1Q8NG50 284 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 PTPMT1Q8WUK0 201 aaPredicted RBP3.7□□□□□ -1.82
CAST-229ENST00000510098 SORCS1Q8WY21 1168 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 SEPT1Q8WYJ6 367 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 HDAC11Q96DB2 347 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 LINGO1Q96FE5 620 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 ERO1AQ96HE7 468 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 TUBB2BQ9BVA1 445 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 DENND2DQ9H6A0 471 aaPredicted RBP3.7□□□□□ -1.82
CAST-229ENST00000510098 EVA1AQ9H8M9 152 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 FKRPQ9H9S5 495 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 LIN28AQ9H9Z2 209 aaKnown RBP3.7□□□□□ -1.82
CAST-229ENST00000510098 ZNF556Q9HAH1 456 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 ACTR3BQ9P1U1 418 aa3.7□□□□□ -1.82
CAST-229ENST00000510098 GAGE2DQ9UEU5 116 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms