RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 SYNDIG1LA6NDD5 238 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 DNM1LO00429 736 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 P4HA2O15460 535 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 TSPAN1O60635 241 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 WDPCPO95876 746 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 DNTTP04053 509 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 HSP90AA1P07900 732 aaKnown RBP3□□□□□ -1.93
OTUD4-207ENST00000509517 ABCB1P08183 1280 aaPredicted RBP3□□□□□ -1.93
OTUD4-207ENST00000509517 CD48P09326 243 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 FRMD6-AS1P0C7T7 363 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 IL11P20809 199 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 ITGA3P26006 1051 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 SLC6A6P31641 620 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 NR0B1P51843 470 aaKnown RBP3□□□□□ -1.93
OTUD4-207ENST00000509517 TPD52P55327 224 aaPredicted RBP3□□□□□ -1.93
OTUD4-207ENST00000509517 POU5F1Q01860 360 aaKnown RBP3□□□□□ -1.93
OTUD4-207ENST00000509517 DMPKQ09013 629 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 IL11RAQ14626 422 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 KIF26BQ2KJY2 2108 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 KIAA1644Q3SXP7 199 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 ALDH1L2Q3SY69 923 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 DCAF10Q5QP82 559 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 LCE3AQ5TA76 89 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 ARHGAP11AQ6P4F7 1023 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 C15orf39Q6ZRI6 1047 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 COMMD2Q86X83 199 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 DNAJC22Q8N4W6 341 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 AVL9Q8NBF6 648 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 OR13J1Q8NGT2 312 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 TMEM190Q8WZ59 177 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 TAF15Q92804 592 aaKnown RBP eCLIP3□□□□□ -1.93
OTUD4-207ENST00000509517 LGALS12Q96DT0 336 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 LITAFQ99732 161 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 RBM4Q9BWF3 364 aaKnown RBP3□□□□□ -1.93
OTUD4-207ENST00000509517 WNT5BQ9H1J7 359 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 GOLPH3LQ9H4A5 285 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 A4GALTQ9NPC4 353 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 SCRT2Q9NQ03 307 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 ZNF701Q9NV72 531 aaPredicted RBP3□□□□□ -1.93
OTUD4-207ENST00000509517 ANAPC2Q9UJX6 822 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 KCNJ14Q9UNX9 436 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 C2CD2Q9Y426 696 aa3□□□□□ -1.93
OTUD4-207ENST00000509517 IGLV9-49A0A0B4J1Y8 123 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 IGHV4-61A0A0C4DH41 118 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 A0A1W2PN81 502 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 ZG16O60844 167 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 RNASEH1O60930 286 aaKnown RBP2.99□□□□□ -1.93
OTUD4-207ENST00000509517 NADKO95544 446 aaPredicted RBP2.99□□□□□ -1.93
OTUD4-207ENST00000509517 CLPTM1O96005 669 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 IGHV4-59P01825 116 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 DANCRP0C864 163 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 EFNA1P20827 205 aaPredicted RBP2.99□□□□□ -1.93
OTUD4-207ENST00000509517 CHRNB4P30926 498 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 CHRNA7P36544 502 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 SLC9A3P48764 834 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 B3GALT5-AS1P59052 145 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 HNRNPKP61978 463 aaKnown RBP eCLIP2.99□□□□□ -1.93
OTUD4-207ENST00000509517 GNB1P62873 340 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 UBXN2AP68543 259 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 PPIGQ13427 754 aaKnown RBP eCLIP2.99□□□□□ -1.93
OTUD4-207ENST00000509517 MRGPRG-AS1Q2M3A8 158 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 TMEM30BQ3MIR4 351 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 GPR139Q6DWJ6 353 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 ADAM5Q6NVV9 412 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 RPUSD3Q6P087 351 aaKnown RBP2.99□□□□□ -1.93
OTUD4-207ENST00000509517 SH2D5Q6ZV89 423 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 ARHGAP24Q8N264 748 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 ZNF383Q8NA42 475 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 TSPAN14Q8NG11 270 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 IRGQQ8WZA9 623 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 NXNL1Q96CM4 212 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 SPDL1Q96EA4 605 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 ZNF830Q96NB3 372 aaPredicted RBP2.99□□□□□ -1.93
OTUD4-207ENST00000509517 SLF1Q9BQI6 1058 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 CCDC106Q9BWC9 280 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 LAT2Q9GZY6 243 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 OPA3Q9H6K4 179 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 ANKZF1Q9H8Y5 726 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 C2orf42Q9NWW7 574 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 HAO2Q9NYQ3 351 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 B3GAT1Q9P2W7 334 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 ZDHHC2Q9UIJ5 367 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 TRPV2Q9Y5S1 764 aa2.99□□□□□ -1.93
OTUD4-207ENST00000509517 STK36Q9NRP7 1315 aa2.98□□□□□ -1.93
OTUD4-207ENST00000509517 LOC101059948A0A1B0GTJ6 334 aa2.98□□□□□ -1.93
OTUD4-207ENST00000509517 TCRBV21S2A2A0A5A6 115 aa2.98□□□□□ -1.93
OTUD4-207ENST00000509517 ERI2A8K979 691 aaKnown RBP2.98□□□□□ -1.93
OTUD4-207ENST00000509517 TCERG1O14776 1098 aaKnown RBP2.98□□□□□ -1.93
OTUD4-207ENST00000509517 ATP6V0E1O15342 81 aa2.98□□□□□ -1.93
OTUD4-207ENST00000509517 IPO8O15397 1037 aaKnown RBP2.98□□□□□ -1.93
OTUD4-207ENST00000509517 PRKRAO75569 313 aaKnown RBP2.98□□□□□ -1.93
OTUD4-207ENST00000509517 PIGNO95427 931 aa2.98□□□□□ -1.93
OTUD4-207ENST00000509517 NGFP01138 241 aa2.98□□□□□ -1.93
OTUD4-207ENST00000509517 LINGO3P0C6S8 592 aa2.98□□□□□ -1.93
OTUD4-207ENST00000509517 PLA2G4BP0C869 781 aa2.98□□□□□ -1.93
OTUD4-207ENST00000509517 PFKFB1P16118 471 aa2.98□□□□□ -1.93
OTUD4-207ENST00000509517 GNB3P16520 340 aa2.98□□□□□ -1.93
OTUD4-207ENST00000509517 CA4P22748 312 aa2.98□□□□□ -1.93
OTUD4-207ENST00000509517 CEACAM8P31997 349 aaPredicted RBP2.98□□□□□ -1.93
OTUD4-207ENST00000509517 KRT20P35900 424 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms